Variant report

Variant rs11607147
Chromosome Location chr11:65346178-65346179
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:65342800-65346400 Enhancers Fetal Brain Male brain
2 chr11:65343800-65346400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
3 chr11:65344000-65346200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr11:65344000-65346200 Flanking Active TSS Duodenum Mucosa Duodenum
5 chr11:65344200-65346400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
6 chr11:65344200-65346400 Weak transcription Ovary ovary
7 chr11:65344200-65346600 Enhancers Fetal Heart heart
8 chr11:65344200-65351400 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr11:65344200-65351800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr11:65344200-65352000 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr11:65344400-65346400 Enhancers Fetal Brain Female brain
12 chr11:65344400-65346800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr11:65344400-65351600 Weak transcription Brain Substantia Nigra brain
14 chr11:65344600-65346200 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
15 chr11:65344600-65346600 Enhancers Sigmoid Colon Sigmoid Colon
16 chr11:65344600-65351800 Weak transcription Brain Angular Gyrus brain
17 chr11:65344800-65348400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr11:65344800-65348600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
19 chr11:65345000-65346200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
20 chr11:65345000-65347400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr11:65345200-65346200 Enhancers HepG2 liver
22 chr11:65345200-65346400 Enhancers Gastric stomach
23 chr11:65345200-65346600 Enhancers Primary T killer memory cells from peripheral blood blood
24 chr11:65345400-65346200 Enhancers Liver Liver
25 chr11:65345400-65346200 Transcr. at gene 5' and 3' GM12878-XiMat blood
26 chr11:65345400-65346400 Genic enhancers Primary T helper naive cells fromperipheralblood blood
27 chr11:65345400-65346400 Enhancers Primary T helper cells PMA-I stimulated --
28 chr11:65345400-65346400 Enhancers Primary T helper cells fromperipheralblood blood
29 chr11:65345400-65346400 Genic enhancers Thymus Thymus
30 chr11:65345400-65346400 Enhancers A549 lung
31 chr11:65345400-65346600 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
32 chr11:65345400-65346600 Genic enhancers Lung lung
33 chr11:65345400-65346800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
34 chr11:65345400-65346800 Weak transcription Placenta Amnion Placenta Amnion
35 chr11:65345400-65346800 Transcr. at gene 5' and 3' Skeletal Muscle Male skeletal muscle
36 chr11:65345400-65347200 Genic enhancers Primary T cells fromperipheralblood blood
37 chr11:65345400-65347400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr11:65345400-65347400 Weak transcription Pancreas Pancrea
39 chr11:65345400-65351600 Weak transcription Brain Anterior Caudate brain
40 chr11:65345600-65346200 Transcr. at gene 5' and 3' Primary monocytes fromperipheralblood blood
41 chr11:65345600-65346200 Enhancers Primary T regulatory cells fromperipheralblood blood
42 chr11:65345600-65346200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr11:65345600-65346200 Transcr. at gene 5' and 3' Colon Smooth Muscle Colon
44 chr11:65345600-65346200 Transcr. at gene 5' and 3' Hela-S3 cervix
45 chr11:65345600-65346400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr11:65345600-65346400 Genic enhancers Fetal Stomach stomach
47 chr11:65345600-65346600 Genic enhancers Breast Myoepithelial Primary Cells Breast
48 chr11:65345600-65346600 Genic enhancers Primary hematopoietic stem cells short term culture blood
49 chr11:65345600-65346600 Transcr. at gene 5' and 3' Stomach Smooth Muscle stomach
50 chr11:65345600-65346800 Genic enhancers Primary B cells from cord blood blood

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