Variant report

Variant	rs11608694
Chromosome Location	chr12:8396426-8396427
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	TAF1	chr12:8394677-8397033	HepG2	liver:	n/a	n/a
2	BCL11A	chr12:8396229-8396448	GM12878	blood:	n/a	n/a
3	MXI1	chr12:8394828-8396940	SK-N-SH	brain:	n/a	chr12:8396138-8396147 chr12:8396136-8396145
4	CHD2	chr12:8396330-8396530	GM12878	blood:	n/a	n/a
5	TCF12	chr12:8395753-8396585	HepG2	liver:	n/a	n/a
6	POLR2A	chr12:8393229-8396624	GM12892	blood:	n/a	n/a
7	USF1	chr12:8395714-8396457	A549	lung:	n/a	n/a
8	MAZ	chr12:8395307-8396564	GM12878	blood:	n/a	chr12:8396136-8396146 chr12:8396086-8396095 chr12:8396135-8396144 chr12:8395544-8395554 chr12:8396135-8396150
9	JUND	chr12:8396239-8396628	HepG2	liver:	n/a	chr12:8396521-8396530
10	RAD21	chr12:8396421-8396755	H1-hESC	embryonic stem cell:	n/a	chr12:8396461-8396475
11	POLR2A	chr12:8396111-8396554	IMR90	lung:	n/a	n/a
12	POLR2A	chr12:8394747-8396460	MCF10A-Er-Src	breast:	n/a	n/a
13	POLR2A	chr12:8395664-8397146	H1-hESC	embryonic stem cell:	n/a	n/a
14	JUND	chr12:8395723-8396556	HepG2	liver:	n/a	chr12:8396521-8396530
15	USF1	chr12:8395812-8396463	GM12878	blood:	n/a	n/a
16	POLR2A	chr12:8396083-8396727	SK-N-SH	brain:	n/a	n/a
17	POLR2A	chr12:8396263-8396792	HepG2	liver:	n/a	n/a
18	POLR2A	chr12:8396287-8396752	HepG2	liver:	n/a	n/a
19	PAX5	chr12:8396295-8396459	GM12878	blood:	n/a	n/a
20	POLR2A	chr12:8395687-8396579	GM12892	blood:	n/a	n/a
21	HEY1	chr12:8394643-8397667	HepG2	liver:	n/a	chr12:8396056-8396071
22	MAZ	chr12:8395287-8396473	Hela-S3	cervix:	n/a	chr12:8396136-8396146 chr12:8396086-8396095 chr12:8396135-8396144 chr12:8395544-8395554 chr12:8396135-8396150
23	HEY1	chr12:8396125-8396574	K562	blood:	n/a	n/a
24	TBP	chr12:8396394-8396737	H1-hESC	embryonic stem cell:	n/a	n/a
25	IRF4	chr12:8395723-8397139	GM12878	blood:	n/a	n/a
26	FOSL2	chr12:8394256-8397152	HepG2	liver:	n/a	chr12:8396521-8396530 chr12:8394788-8394800 chr12:8394789-8394800 chr12:8394790-8394798
27	POLR2A	chr12:8396376-8396742	H1-hESC	embryonic stem cell:	n/a	n/a
28	POLR2A	chr12:8395660-8396731	Hela-S3	cervix:	n/a	n/a
29	USF1	chr12:8396231-8396506	HepG2	liver:	n/a	chr12:8396455-8396471
30	POLR2A	chr12:8396131-8396467	HepG2	liver:	n/a	n/a
31	TCF12	chr12:8395919-8396571	GM12878	blood:	n/a	n/a
32	TAF1	chr12:8396183-8396983	H1-hESC	embryonic stem cell:	n/a	n/a
33	MXI1	chr12:8396047-8396679	HepG2	liver:	n/a	chr12:8396138-8396147 chr12:8396136-8396145
34	E2F4	chr12:8395413-8396453	MCF10A-Er-Src	breast:	n/a	chr12:8396050-8396059 chr12:8395832-8395842 chr12:8396237-8396249
35	POLR2A	chr12:8393196-8396999	GM12892	blood:	n/a	n/a
36	POU2F2	chr12:8395662-8397146	GM12891	blood:	n/a	chr12:8396059-8396071
37	POLR2A	chr12:8395659-8397126	GM12878	blood:	n/a	n/a
38	IRF1	chr12:8395476-8396441	K562	blood:	n/a	chr12:8395827-8395841 chr12:8396115-8396129 chr12:8395974-8395988 chr12:8396060-8396074 chr12:8396212-8396226 chr12:8396198-8396212 chr12:8396049-8396063 chr12:8395543-8395557 chr12:8396163-8396177 chr12:8396307-8396321
39	PBX3	chr12:8396253-8396499	GM12878	blood:	n/a	n/a
40	POLR2A	chr12:8395666-8397061	HepG2	liver:	n/a	n/a
41	SP1	chr12:8395182-8396616	A549	lung:	n/a	chr12:8396352-8396361 chr12:8396062-8396071 chr12:8396061-8396070 chr12:8396521-8396533 chr12:8396051-8396060 chr12:8396046-8396060 chr12:8395687-8395698 chr12:8396463-8396475 chr12:8395910-8395924 chr12:8396522-8396531 chr12:8396014-8396023 chr12:8396142-8396154 chr12:8396050-8396059 chr12:8396115-8396127 chr12:8396463-8396475 chr12:8395827-8395839 chr12:8396209-8396223 chr12:8396144-8396153 chr12:8395635-8395646 chr12:8395827-8395839 chr12:8395829-8395838 chr12:8396309-8396318 chr12:8396308-8396318 chr12:8396518-8396532 chr12:8396491-8396500 chr12:8396307-8396319 chr12:8395828-8395838 chr12:8395543-8395555 chr12:8396060-8396072 chr12:8396060-8396072 chr12:8396049-8396061 chr12:8396521-8396533 chr12:8395544-8395554 chr12:8396307-8396319 chr12:8395544-8395553 chr12:8395829-8395838 chr12:8396309-8396318 chr12:8396061-8396071 chr12:8396465-8396474 chr12:8395544-8395554 chr12:8395543-8395555 chr12:8396308-8396317 chr12:8395828-8395837 chr12:8396523-8396532 chr12:8396494-8396506 chr12:8395545-8395554 chr12:8396062-8396071 chr12:8395675-8395686 chr12:8396142-8396154 chr12:8396212-8396224 chr12:8396061-8396071 chr12:8396049-8396061
42	HEY1	chr12:8396180-8397243	HepG2	liver:	n/a	n/a
43	MAZ	chr12:8395339-8396451	K562	blood:	n/a	chr12:8396136-8396146 chr12:8396086-8396095 chr12:8396135-8396144 chr12:8395544-8395554 chr12:8396135-8396150
44	POLR2A	chr12:8395694-8396734	HepG2	liver:	n/a	n/a
45	HCFC1	chr12:8394835-8396530	Hela-S3	cervix:	n/a	n/a
46	POLR2A	chr12:8395659-8396727	A549	lung:	n/a	n/a
47	POU2F2	chr12:8395659-8397129	GM12878	blood:	n/a	chr12:8396059-8396071
48	IRF4	chr12:8396204-8397128	GM12878	blood:	n/a	n/a
49	TAF1	chr12:8396207-8397110	H1-hESC	embryonic stem cell:	n/a	n/a
50	POLR2A	chr12:8394678-8397114	H1-hESC	embryonic stem cell:	n/a	n/a

Variant related genes	Relation type
FAM86FP	TF binding region

Extended variants
information (count: 56 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10466780	0.86[AFR][1000 genomes]
rs10770389	0.81[AFR][1000 genomes]
rs13377608	0.81[EUR][1000 genomes]
rs1976013	0.80[AMR][1000 genomes];0.80[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs35731850	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs3890166	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs61922582	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs61925285	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs61925286	0.93[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7956177	0.84[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:46 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1048545	chr12:7778760-8608231	Weak transcription Transcr. at gene 5' and 3' Enhancers Active TSS Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	97 gene(s)	inside rSNPs	diseases
2	nsv541368	chr12:7778760-8608231	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	97 gene(s)	inside rSNPs	diseases
3	esv1795892	chr12:7856819-8508693	Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	84 gene(s)	inside rSNPs	diseases
4	esv2758292	chr12:7856819-8623987	Enhancers Active TSS Genic enhancers Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
5	esv2759877	chr12:7856819-8623987	Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
6	nsv428270	chr12:7856819-8623987	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
7	esv1793572	chr12:7995827-8568422	Enhancers Active TSS Genic enhancers Strong transcription Flanking Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
8	nsv916941	chr12:8003501-8608220	Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	86 gene(s)	inside rSNPs	diseases
9	nsv1040302	chr12:8245364-8695612	Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
10	nsv541397	chr12:8245364-8695612	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
11	esv1796538	chr12:8276546-8508693	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
12	nsv427902	chr12:8276546-8623987	Active TSS Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
13	esv2757488	chr12:8280755-8580804	Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
14	esv1799331	chr12:8308073-8568222	Flanking Active TSS Active TSS Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
15	esv1808210	chr12:8309095-8530951	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
16	nsv1040962	chr12:8317823-8584660	Enhancers Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
17	nsv1036525	chr12:8317823-8603777	Flanking Active TSS Active TSS Weak transcription Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
18	nsv1042365	chr12:8320887-8420824	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
19	nsv1049334	chr12:8320887-8529380	Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
20	esv1803603	chr12:8321028-8408195	Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Weak transcription Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
21	nsv557332	chr12:8321048-8598823	Enhancers Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
22	nsv557333	chr12:8321048-8599397	Enhancers Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
23	esv1805367	chr12:8322412-8419627	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
24	esv16224	chr12:8323225-8589822	Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS Enhancers Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
25	nsv1036867	chr12:8329500-8581129	Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
26	esv1804506	chr12:8333011-8561680	Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
27	nsv1050342	chr12:8334885-8581129	Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Strong transcription Weak transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
28	nsv1048534	chr12:8334885-8584660	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
29	nsv1041279	chr12:8343961-8429979	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
30	nsv1038563	chr12:8343961-8449100	Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
31	esv1816305	chr12:8343961-8584660	Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
32	nsv433419	chr12:8346608-8431001	Weak transcription Flanking Active TSS Active TSS Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
33	nsv1040012	chr12:8357507-8584660	Weak transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
34	esv2760766	chr12:8357507-8584672	Bivalent Enhancer Enhancers Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
35	nsv898733	chr12:8357507-8600363	Active TSS Enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
36	esv1848469	chr12:8361724-8589775	Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
37	nsv1050188	chr12:8362038-8581129	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
38	nsv1050955	chr12:8362038-8584660	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
39	nsv898734	chr12:8367694-8568358	Enhancers Bivalent/Poised TSS Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
40	nsv1043700	chr12:8370702-8584660	Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
41	nsv1054161	chr12:8371320-8584660	Active TSS Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
42	nsv973015	chr12:8371568-8602961	Enhancers Flanking Active TSS Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
43	nsv1050081	chr12:8378239-8584660	Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
44	esv2523633	chr12:8379136-8403735	Active TSS Bivalent/Poised TSS Enhancers Flanking Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
45	nsv557339	chr12:8379967-8431001	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
46	nsv1039971	chr12:8393816-8584660	Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:8394400-8397000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr12:8394400-8397000	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr12:8394400-8397600	Active TSS	ES-I3 Cell Line	embryonic stem cell
4	chr12:8394600-8396800	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr12:8394800-8396600	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr12:8394800-8396600	Active TSS	Primary T helper naive cells fromperipheralblood	blood
7	chr12:8394800-8396600	Active TSS	Muscle Satellite Cultured Cells	--
8	chr12:8394800-8396600	Active TSS	HSMM	muscle
9	chr12:8394800-8396600	Active TSS	K562	blood
10	chr12:8394800-8396600	Active TSS	NH-A	brain
11	chr12:8394800-8396800	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr12:8394800-8396800	Active TSS	Brain Anterior Caudate	brain
13	chr12:8394800-8396800	Active TSS	Esophagus	oesophagus
14	chr12:8394800-8396800	Active TSS	Pancreatic Islets	Pancreatic Islet
15	chr12:8394800-8396800	Active TSS	Ovary	ovary
16	chr12:8394800-8396800	Active TSS	Psoas Muscle	Psoas
17	chr12:8394800-8396800	Active TSS	Spleen	Spleen
18	chr12:8394800-8396800	Active TSS	A549	lung
19	chr12:8394800-8396800	Active TSS	HepG2	liver
20	chr12:8394800-8396800	Active TSS	HMEC	breast
21	chr12:8394800-8397000	Active TSS	H1 Cell Line	embryonic stem cell
22	chr12:8394800-8397000	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
23	chr12:8394800-8397000	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr12:8394800-8397000	Active TSS	H9 Cell Line	embryonic stem cell
25	chr12:8394800-8397000	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr12:8394800-8397000	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
27	chr12:8394800-8397000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
28	chr12:8394800-8397000	Active TSS	HUES48 Cell Line	embryonic stem cell
29	chr12:8394800-8397000	Active TSS	HUES6 Cell Line	embryonic stem cell
30	chr12:8394800-8397000	Active TSS	HUES64 Cell Line	embryonic stem cell
31	chr12:8394800-8397000	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
32	chr12:8394800-8397000	Active TSS	iPS-15b Cell Line	embryonic stem cell
33	chr12:8394800-8397000	Active TSS	iPS-18 Cell Line	embryonic stem cell
34	chr12:8394800-8397000	Active TSS	iPS-20b Cell Line	embryonic stem cell
35	chr12:8394800-8397000	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
36	chr12:8394800-8397000	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
37	chr12:8394800-8397000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
38	chr12:8394800-8397000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
39	chr12:8394800-8397000	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
40	chr12:8394800-8397000	Active TSS	Breast Myoepithelial Primary Cells	Breast
41	chr12:8394800-8397000	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
42	chr12:8394800-8397000	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
43	chr12:8394800-8397000	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
44	chr12:8394800-8397000	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
45	chr12:8394800-8397000	Active TSS	Colonic Mucosa	Colon
46	chr12:8394800-8397000	Active TSS	Duodenum Mucosa	Duodenum
47	chr12:8394800-8397000	Active TSS	Duodenum Smooth Muscle	Duodenum
48	chr12:8394800-8397000	Active TSS	Fetal Kidney	kidney
49	chr12:8394800-8397000	Active TSS	Rectal Mucosa Donor 29	rectum
50	chr12:8394800-8397000	Active TSS	Rectal Mucosa Donor 31	rectum

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