Variant report

Variant rs116089088
Chromosome Location chr4:3438396-3438397
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:3416800-3438400 Weak transcription NHDF-Ad bronchial
2 chr4:3417200-3444800 Weak transcription Primary hematopoietic stem cells blood
3 chr4:3419200-3444600 Weak transcription Primary monocytes fromperipheralblood blood
4 chr4:3419400-3438400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr4:3419600-3438400 Weak transcription NH-A brain
6 chr4:3419800-3438800 Weak transcription NHLF lung
7 chr4:3420200-3438400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr4:3420400-3438600 Weak transcription Monocytes-CD14+_RO01746 blood
9 chr4:3425600-3438400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr4:3425800-3438600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr4:3427000-3442000 Weak transcription Colon Smooth Muscle Colon
12 chr4:3427000-3443200 Weak transcription Brain Substantia Nigra brain
13 chr4:3427200-3438400 Weak transcription HUVEC blood vessel
14 chr4:3430800-3445200 Weak transcription Primary T regulatory cells fromperipheralblood blood
15 chr4:3431400-3441400 Weak transcription Fetal Lung lung
16 chr4:3431600-3442600 Weak transcription Colonic Mucosa Colon
17 chr4:3431800-3444600 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr4:3432200-3438400 Weak transcription HepG2 liver
19 chr4:3432400-3438600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr4:3433000-3445200 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr4:3433200-3444800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr4:3433600-3438400 Weak transcription Brain Cingulate Gyrus brain
23 chr4:3433600-3438400 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr4:3433600-3440200 Weak transcription Ovary ovary
25 chr4:3433600-3444600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr4:3433800-3441000 Weak transcription Duodenum Mucosa Duodenum
27 chr4:3434200-3438400 Weak transcription Placenta Amnion Placenta Amnion
28 chr4:3434200-3439600 Weak transcription Brain Inferior Temporal Lobe brain
29 chr4:3434200-3442600 Weak transcription Liver Liver
30 chr4:3434800-3441400 Weak transcription Brain Hippocampus Middle brain
31 chr4:3435200-3439600 Weak transcription Adipose Nuclei Adipose
32 chr4:3435600-3438400 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr4:3435600-3441400 Weak transcription Fetal Intestine Large intestine
34 chr4:3436400-3438400 Weak transcription Pancreas Pancrea
35 chr4:3436400-3439200 Weak transcription Spleen Spleen
36 chr4:3436400-3441800 Weak transcription Lung lung
37 chr4:3436400-3443000 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr4:3436400-3444400 Weak transcription Primary T cells from cord blood blood
39 chr4:3436400-3444400 Weak transcription Stomach Smooth Muscle stomach
40 chr4:3436400-3445200 Weak transcription Fetal Intestine Small intestine
41 chr4:3436600-3449000 Weak transcription Fetal Brain Female brain
42 chr4:3436800-3443000 Enhancers Fetal Muscle Leg muscle
43 chr4:3436800-3445400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr4:3437000-3442600 Enhancers Fetal Muscle Trunk muscle
45 chr4:3437000-3450000 Weak transcription Brain Germinal Matrix brain
46 chr4:3437200-3439200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr4:3437200-3440600 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
48 chr4:3437200-3451200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr4:3437400-3438400 Genic enhancers Fetal Stomach stomach
50 chr4:3437400-3440400 Enhancers Breast Myoepithelial Primary Cells Breast

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