Variant report

Variant	rs116119056
Chromosome Location	chr3:101252444-101252445
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3463443	chr3:101251356-101254118	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	esv3463441	chr3:101251374-101254124	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	esv3463444	chr3:101251401-101254079	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	esv3463445	chr3:101251401-101254079	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	esv10386	chr3:101251512-101253932	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:101249400-101252800	Enhancers	HUVEC	blood vessel
2	chr3:101249600-101254000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr3:101250200-101253200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr3:101250400-101253000	Enhancers	NHEK	skin
5	chr3:101250600-101253000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr3:101251000-101252800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr3:101251600-101253600	Enhancers	Rectal Smooth Muscle	rectum
8	chr3:101251800-101252800	Enhancers	Fetal Heart	heart
9	chr3:101251800-101253200	Enhancers	Colon Smooth Muscle	Colon
10	chr3:101251800-101253600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
11	chr3:101251800-101260800	Weak transcription	Primary T cells from cord blood	blood
12	chr3:101252000-101252800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
13	chr3:101252000-101252800	Enhancers	Psoas Muscle	Psoas
14	chr3:101252000-101253200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
15	chr3:101252000-101253400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr3:101252200-101253200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr3:101252200-101254800	Weak transcription	Placenta	Placenta
18	chr3:101252400-101254200	Enhancers	K562	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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