Variant report

Variant	rs116121520
Chromosome Location	chr2:211994349-211994350
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1012193	chr2:211684524-212072213	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv834521	chr2:211918881-212057872	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv875773	chr2:211973600-212041403	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv460063	chr2:211981894-211996803	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv584311	chr2:211981894-211996803	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3383196	chr2:211992907-211996105	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3392696	chr2:211993457-211995755	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:211991800-211994600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr2:211993400-211997000	Weak transcription	NHEK	skin
3	chr2:211993600-211994800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr2:211993600-211994800	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr2:211993600-211994800	Weak transcription	HUES64 Cell Line	embryonic stem cell
6	chr2:211993600-211996800	Weak transcription	HMEC	breast
7	chr2:211993600-211997400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr2:211994200-211994600	Weak transcription	Hela-S3	cervix
9	chr2:211994200-211995400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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