Variant report

Variant	rs116122813
Chromosome Location	chr11:105792034-105792035
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832257	chr11:105662753-105817576	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv976504	chr11:105791898-105795864	Strong transcription Enhancers Flanking Active TSS Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:105786000-105793800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr11:105786400-105793800	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr11:105787200-105793800	Weak transcription	Brain Angular Gyrus	brain
4	chr11:105789200-105793000	Weak transcription	Fetal Lung	lung
5	chr11:105790200-105794000	Weak transcription	Fetal Brain Female	brain
6	chr11:105791400-105792400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
7	chr11:105791800-105792200	Enhancers	Fetal Brain Male	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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