Variant report
| Variant | rs11614842 |
|---|---|
| Chromosome Location | chr12:59308627-59308628 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:59266000-59311000 | Weak transcription | Fetal Thymus | thymus |
| 2 | chr12:59279000-59310800 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 3 | chr12:59279200-59309400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 4 | chr12:59290600-59311000 | Weak transcription | Right Ventricle | heart |
| 5 | chr12:59292400-59309200 | Weak transcription | Fetal Heart | heart |
| 6 | chr12:59292400-59310600 | Weak transcription | Small Intestine | intestine |
| 7 | chr12:59301200-59309400 | Weak transcription | GM12878-XiMat | blood |
| 8 | chr12:59302000-59313000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 9 | chr12:59302200-59309200 | Weak transcription | Ovary | ovary |
| 10 | chr12:59302400-59309000 | Weak transcription | A549 | lung |
| 11 | chr12:59302800-59309400 | Weak transcription | Pancreas | Pancrea |
| 12 | chr12:59302800-59309600 | Weak transcription | Colonic Mucosa | Colon |
| 13 | chr12:59303200-59313400 | Transcr. at gene 5' and 3' | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 14 | chr12:59303800-59309400 | Weak transcription | Esophagus | oesophagus |
| 15 | chr12:59303800-59311800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 16 | chr12:59303800-59312400 | Weak transcription | Gastric | stomach |
| 17 | chr12:59303800-59313000 | Weak transcription | Lung | lung |
| 18 | chr12:59304800-59312800 | Weak transcription | Placenta | Placenta |
| 19 | chr12:59305000-59308800 | Weak transcription | Brain Anterior Caudate | brain |
| 20 | chr12:59305000-59309200 | Weak transcription | Brain Angular Gyrus | brain |
| 21 | chr12:59305000-59309400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 22 | chr12:59305200-59309200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 23 | chr12:59305200-59309400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 24 | chr12:59305200-59309400 | Weak transcription | Psoas Muscle | Psoas |
| 25 | chr12:59305200-59309600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 26 | chr12:59305200-59310600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 27 | chr12:59305800-59308800 | Enhancers | Stomach Mucosa | stomach |
| 28 | chr12:59306600-59313000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 29 | chr12:59306800-59309000 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 30 | chr12:59306800-59309400 | Enhancers | HepG2 | liver |
| 31 | chr12:59306800-59310400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 32 | chr12:59307400-59308800 | Enhancers | Duodenum Smooth Muscle | Duodenum |
| 33 | chr12:59307400-59309200 | Enhancers | Fetal Intestine Small | intestine |
| 34 | chr12:59307400-59310800 | Weak transcription | Hela-S3 | cervix |
| 35 | chr12:59307600-59308800 | Weak transcription | Duodenum Mucosa | Duodenum |
| 36 | chr12:59307600-59309000 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 37 | chr12:59307600-59309200 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 38 | chr12:59307600-59309400 | Weak transcription | Fetal Muscle Trunk | muscle |
| 39 | chr12:59307600-59311200 | Flanking Active TSS | HUVEC | blood vessel |
| 40 | chr12:59307800-59308800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 41 | chr12:59307800-59308800 | Enhancers | Stomach Smooth Muscle | stomach |
| 42 | chr12:59307800-59309000 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 43 | chr12:59307800-59309000 | Weak transcription | Adipose Nuclei | Adipose |
| 44 | chr12:59307800-59309000 | Enhancers | Fetal Kidney | kidney |
| 45 | chr12:59307800-59309000 | Enhancers | Fetal Lung | lung |
| 46 | chr12:59307800-59309200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 47 | chr12:59307800-59309200 | Enhancers | Fetal Intestine Large | intestine |
| 48 | chr12:59307800-59309200 | Weak transcription | NHLF | lung |
| 49 | chr12:59307800-59309400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 50 | chr12:59307800-59309400 | Weak transcription | Fetal Muscle Leg | muscle |
