The 2.0 version of rSNPBase

Variant report

Variant rs116170192
Chromosome Location chr7:129299678-129299679
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:129283800-129331600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr7:129286600-129301600 Weak transcription HSMMtube muscle
3 chr7:129286800-129304400 Weak transcription NHLF lung
4 chr7:129287200-129301600 Weak transcription Psoas Muscle Psoas
5 chr7:129289200-129314000 Weak transcription Fetal Brain Male brain
6 chr7:129290000-129325800 Weak transcription Stomach Mucosa stomach
7 chr7:129290400-129304600 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr7:129293600-129301600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr7:129293800-129311200 Weak transcription Brain Anterior Caudate brain
10 chr7:129293800-129311400 Weak transcription Brain Angular Gyrus brain
11 chr7:129294000-129300400 Weak transcription Fetal Brain Female brain
12 chr7:129296600-129301600 Strong transcription Primary T helper cells fromperipheralblood blood
13 chr7:129296800-129300600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
14 chr7:129296800-129300600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
15 chr7:129296800-129301400 Strong transcription Primary T regulatory cells fromperipheralblood blood
16 chr7:129297000-129300200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr7:129297000-129300200 Strong transcription Primary T cells from cord blood blood
18 chr7:129297000-129300200 Strong transcription Primary hematopoietic stem cells short term culture blood
19 chr7:129297000-129300400 Strong transcription Primary B cells from cord blood blood
20 chr7:129297000-129300400 Strong transcription Fetal Intestine Large intestine
21 chr7:129297000-129300400 Strong transcription Placenta Placenta
22 chr7:129297000-129300600 Strong transcription Primary T helper cells PMA-I stimulated --
23 chr7:129297000-129300800 Strong transcription Duodenum Mucosa Duodenum
24 chr7:129297000-129301000 Strong transcription Primary T cells fromperipheralblood blood
25 chr7:129297000-129301000 Strong transcription Osteobl bone
26 chr7:129297000-129301600 Strong transcription Fetal Lung lung
27 chr7:129297000-129301600 Strong transcription Skeletal Muscle Female skeletal muscle
28 chr7:129297000-129302200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr7:129297000-129302200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr7:129297000-129302200 Strong transcription Rectal Mucosa Donor 31 rectum
31 chr7:129297200-129299800 Strong transcription Primary T killer naive cells fromperipheralblood blood
32 chr7:129297200-129299800 Strong transcription Primary T killer memory cells from peripheral blood blood
33 chr7:129297200-129299800 Strong transcription Colon Smooth Muscle Colon
34 chr7:129297200-129299800 Strong transcription Fetal Intestine Small intestine
35 chr7:129297200-129300000 Strong transcription Primary B cells from peripheral blood blood
36 chr7:129297200-129300000 Strong transcription Muscle Satellite Cultured Cells --
37 chr7:129297200-129300000 Strong transcription Hela-S3 cervix
38 chr7:129297200-129300400 Strong transcription Fetal Muscle Trunk muscle
39 chr7:129297200-129300400 Strong transcription Fetal Stomach stomach
40 chr7:129297200-129300600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr7:129297200-129300600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
42 chr7:129297200-129300800 Strong transcription Liver Liver
43 chr7:129297200-129300800 Strong transcription HepG2 liver
44 chr7:129297200-129301000 Strong transcription Breast Myoepithelial Primary Cells Breast
45 chr7:129297200-129301400 Strong transcription Ovary ovary
46 chr7:129297200-129301600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr7:129297200-129301800 Strong transcription Adipose Nuclei Adipose
48 chr7:129297200-129302000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr7:129297200-129302000 Strong transcription Rectal Mucosa Donor 29 rectum
50 chr7:129297200-129302200 Strong transcription Primary T helper naive cells from peripheral blood blood

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Last update: Aug 31, 2015