Variant report
| Variant | rs1162788 |
|---|---|
| Chromosome Location | chr12:64450395-64450396 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:64418600-64456400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 2 | chr12:64428800-64450800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 3 | chr12:64432000-64466400 | Weak transcription | Pancreas | Pancrea |
| 4 | chr12:64433600-64452400 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 5 | chr12:64433600-64460800 | Weak transcription | Aorta | Aorta |
| 6 | chr12:64433600-64474200 | Weak transcription | Left Ventricle | heart |
| 7 | chr12:64433800-64452000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 8 | chr12:64433800-64458600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 9 | chr12:64433800-64460000 | Weak transcription | NH-A | brain |
| 10 | chr12:64434000-64451800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 11 | chr12:64434000-64456600 | Weak transcription | HMEC | breast |
| 12 | chr12:64434000-64458200 | Weak transcription | Fetal Intestine Large | intestine |
| 13 | chr12:64434000-64481600 | Weak transcription | HUVEC | blood vessel |
| 14 | chr12:64434400-64452600 | Weak transcription | Fetal Brain Male | brain |
| 15 | chr12:64436600-64474200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 16 | chr12:64436800-64452800 | Weak transcription | Fetal Muscle Leg | muscle |
| 17 | chr12:64436800-64458600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 18 | chr12:64436800-64458600 | Weak transcription | Fetal Stomach | stomach |
| 19 | chr12:64436800-64474200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 20 | chr12:64438200-64458200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 21 | chr12:64438200-64458400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 22 | chr12:64440000-64458400 | Weak transcription | Fetal Intestine Small | intestine |
| 23 | chr12:64440000-64479200 | Weak transcription | Esophagus | oesophagus |
| 24 | chr12:64440800-64456200 | Weak transcription | NHEK | skin |
| 25 | chr12:64441000-64475000 | Weak transcription | Hela-S3 | cervix |
| 26 | chr12:64441400-64458000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 27 | chr12:64443800-64450600 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 28 | chr12:64445200-64474200 | Weak transcription | Fetal Lung | lung |
| 29 | chr12:64447000-64452800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 30 | chr12:64447200-64451400 | Weak transcription | NHDF-Ad | bronchial |
| 31 | chr12:64448800-64451800 | Weak transcription | Brain Substantia Nigra | brain |
| 32 | chr12:64449000-64458600 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 33 | chr12:64449200-64452600 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 34 | chr12:64449400-64450400 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 35 | chr12:64449400-64450800 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 36 | chr12:64449400-64451000 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 37 | chr12:64449400-64451400 | Strong transcription | HSMM | muscle |
| 38 | chr12:64449400-64452000 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 39 | chr12:64449600-64451800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 40 | chr12:64449600-64453600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 41 | chr12:64449600-64458400 | Weak transcription | Ovary | ovary |
| 42 | chr12:64449800-64451800 | Weak transcription | Brain Hippocampus Middle | brain |
| 43 | chr12:64449800-64452000 | Weak transcription | Fetal Brain Female | brain |
| 44 | chr12:64449800-64453400 | Weak transcription | Psoas Muscle | Psoas |
| 45 | chr12:64449800-64455600 | Weak transcription | A549 | lung |
| 46 | chr12:64449800-64458400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 47 | chr12:64450000-64450400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 48 | chr12:64450000-64451600 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 49 | chr12:64450000-64451800 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 50 | chr12:64450000-64453200 | Weak transcription | Osteobl | bone |
