Variant report

Variant	rs11629263
Chromosome Location	chr14:24237214-24237215
allele	A/C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10131522	0.83[ASN][1000 genomes]
rs10132296	0.82[ASN][1000 genomes]
rs10135864	0.84[AMR][1000 genomes]
rs10139682	0.86[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs10152087	0.86[AMR][1000 genomes]
rs12587676	0.86[AMR][1000 genomes]
rs12590214	0.86[AMR][1000 genomes]
rs12895379	0.86[AMR][1000 genomes]
rs1958314	0.86[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs1958315	0.86[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs1958316	0.86[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs6573369	0.83[ASN][1000 genomes]
rs6573370	0.83[ASN][1000 genomes]
rs6573371	0.82[ASN][1000 genomes]
rs7143320	0.86[AMR][1000 genomes]
rs7147835	0.86[AMR][1000 genomes]
rs7151668	0.83[ASN][1000 genomes]
rs7153076	0.86[AMR][1000 genomes]
rs7156687	0.86[AMR][1000 genomes]
rs7157353	0.86[AMR][1000 genomes]
rs7157519	0.86[AMR][1000 genomes]
rs8009100	0.82[ASN][1000 genomes]
rs8011269	0.86[AMR][1000 genomes]
rs8015642	0.86[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1043299	chr14:23766696-24351724	Active TSS Enhancers Flanking Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
2	esv3405661	chr14:24189883-24670942	Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	131 gene(s)	inside rSNPs	diseases
3	nsv564045	chr14:24224245-24348343	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	nsv983931	chr14:24234281-24242258	Enhancers Weak transcription	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:24237200-24238400	Weak transcription	Liver	Liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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