The 2.0 version of rSNPBase

Variant report

Variant rs116339511
Chromosome Location chr6:34318196-34318197
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:34261800-34330800 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr6:34285200-34330600 Weak transcription Thymus Thymus
3 chr6:34285800-34326600 Weak transcription iPS-20b Cell Line embryonic stem cell
4 chr6:34289000-34325200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr6:34298600-34326400 Weak transcription A549 lung
6 chr6:34306000-34327800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr6:34306000-34328800 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr6:34307000-34320000 Weak transcription Ovary ovary
9 chr6:34308800-34330800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr6:34309200-34318200 Weak transcription Fetal Lung lung
11 chr6:34309600-34319800 Weak transcription Small Intestine intestine
12 chr6:34309600-34329200 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr6:34309800-34318600 Weak transcription HMEC breast
14 chr6:34309800-34320000 Weak transcription Fetal Adrenal Gland Adrenal Gland
15 chr6:34309800-34320000 Weak transcription Pancreas Pancrea
16 chr6:34309800-34320200 Weak transcription HepG2 liver
17 chr6:34309800-34321400 Weak transcription Lung lung
18 chr6:34309800-34327000 Weak transcription Fetal Muscle Trunk muscle
19 chr6:34309800-34329800 Weak transcription Fetal Thymus thymus
20 chr6:34309800-34330800 Weak transcription Primary T helper naive cells from peripheral blood blood
21 chr6:34309800-34337600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr6:34309800-34347200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr6:34310000-34320200 Weak transcription Fetal Stomach stomach
24 chr6:34310000-34330600 Weak transcription Dnd41 blood
25 chr6:34310200-34318200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr6:34310400-34320000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr6:34310400-34321600 Weak transcription Right Ventricle heart
28 chr6:34310400-34329200 Weak transcription Brain Angular Gyrus brain
29 chr6:34310600-34320000 Weak transcription Brain Cingulate Gyrus brain
30 chr6:34310600-34326400 Weak transcription Rectal Smooth Muscle rectum
31 chr6:34310800-34318800 Weak transcription Right Atrium heart
32 chr6:34310800-34320000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr6:34310800-34330800 Weak transcription Primary T cells from cord blood blood
34 chr6:34311200-34321800 Weak transcription Psoas Muscle Psoas
35 chr6:34312400-34318600 Weak transcription Brain Anterior Caudate brain
36 chr6:34313400-34319000 Weak transcription Left Ventricle heart
37 chr6:34314800-34318200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr6:34314800-34320200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr6:34315200-34318800 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr6:34315400-34351200 Weak transcription Pancreatic Islets Pancreatic Islet
41 chr6:34316200-34333400 Weak transcription Placenta Placenta
42 chr6:34317000-34318200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr6:34317000-34318800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr6:34317000-34318800 Enhancers Skeletal Muscle Female skeletal muscle
45 chr6:34317000-34319000 Enhancers Muscle Satellite Cultured Cells --
46 chr6:34317000-34320400 Enhancers Primary monocytes fromperipheralblood blood
47 chr6:34317200-34318800 Enhancers Fetal Heart heart
48 chr6:34317200-34319400 Enhancers Primary neutrophils fromperipheralblood blood
49 chr6:34317200-34319400 Enhancers HSMM muscle
50 chr6:34317400-34318600 Enhancers Osteobl bone

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Last update: Aug 31, 2015