The 2.0 version of rSNPBase

Variant report

Variant rs11634644
Chromosome Location chr15:40631943-40631944
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:40621000-40637600 Enhancers Fetal Heart heart
2 chr15:40621200-40633400 Weak transcription Fetal Kidney kidney
3 chr15:40622400-40633800 Enhancers Spleen Spleen
4 chr15:40625800-40642800 Enhancers Fetal Intestine Large intestine
5 chr15:40626600-40633800 Enhancers Primary monocytes fromperipheralblood blood
6 chr15:40627000-40632200 Enhancers Primary hematopoietic stem cells short term culture blood
7 chr15:40627000-40633400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
8 chr15:40627800-40632200 Weak transcription Small Intestine intestine
9 chr15:40628800-40633600 Enhancers Placenta Placenta
10 chr15:40629000-40632000 Enhancers Fetal Muscle Trunk muscle
11 chr15:40629000-40632400 Enhancers Fetal Intestine Small intestine
12 chr15:40629400-40633600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr15:40629400-40637200 Enhancers Fetal Lung lung
14 chr15:40629600-40632000 Enhancers Cortex derived primary cultured neurospheres brain
15 chr15:40629600-40632000 Enhancers Fetal Muscle Leg muscle
16 chr15:40629600-40633400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr15:40629600-40633600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr15:40629600-40633600 Enhancers Ovary ovary
19 chr15:40629800-40632000 Enhancers Brain Germinal Matrix brain
20 chr15:40629800-40632600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
21 chr15:40629800-40633600 Flanking Active TSS Colonic Mucosa Colon
22 chr15:40629800-40634000 Enhancers Placenta Amnion Placenta Amnion
23 chr15:40630000-40632200 Enhancers Fetal Stomach stomach
24 chr15:40630000-40632200 Enhancers Stomach Mucosa stomach
25 chr15:40630000-40632600 Flanking Active TSS HSMMtube muscle
26 chr15:40630000-40633400 Enhancers Fetal Brain Male brain
27 chr15:40630000-40633400 Flanking Active TSS NH-A brain
28 chr15:40630000-40633600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr15:40630000-40633600 Enhancers Fetal Adrenal Gland Adrenal Gland
30 chr15:40630200-40632400 Weak transcription ES-WA7 Cell Line embryonic stem cell
31 chr15:40630200-40633000 Flanking Active TSS Brain Inferior Temporal Lobe brain
32 chr15:40630200-40633000 Flanking Active TSS Osteobl bone
33 chr15:40630200-40633200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr15:40630200-40633400 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
35 chr15:40630400-40632200 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr15:40630400-40632200 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin03 Skin
37 chr15:40630400-40632200 Transcr. at gene 5' and 3' Skeletal Muscle Male skeletal muscle
38 chr15:40630400-40632400 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin01 Skin
39 chr15:40630400-40632400 Enhancers Monocytes-CD14+_RO01746 blood
40 chr15:40630400-40632600 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr15:40630400-40632600 Flanking Active TSS Rectal Smooth Muscle rectum
42 chr15:40630400-40632600 Flanking Active TSS Hela-S3 cervix
43 chr15:40630400-40632800 Weak transcription iPS-18 Cell Line embryonic stem cell
44 chr15:40630400-40633000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr15:40630400-40633400 Flanking Active TSS Muscle Satellite Cultured Cells --
46 chr15:40630400-40633800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
47 chr15:40630400-40635400 Weak transcription Primary hematopoietic stem cells blood
48 chr15:40630600-40632000 Enhancers Gastric stomach
49 chr15:40630600-40632000 Enhancers Lung lung
50 chr15:40630600-40632200 Enhancers Aorta Aorta

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Last update: Aug 31, 2015