The 2.0 version of rSNPBase

Variant report

Variant rs11636296
Chromosome Location chr15:49327061-49327062
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:49282800-49333400 Weak transcription A549 lung
2 chr15:49283600-49337600 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr15:49285000-49329000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr15:49289200-49336400 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr15:49298000-49328400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr15:49298000-49328800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr15:49298200-49329800 Strong transcription Primary T helper cells fromperipheralblood blood
8 chr15:49298600-49329600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr15:49301400-49329000 Weak transcription K562 blood
10 chr15:49303000-49327600 Weak transcription Right Ventricle heart
11 chr15:49308400-49327600 Weak transcription Dnd41 blood
12 chr15:49308800-49328200 Weak transcription Small Intestine intestine
13 chr15:49308800-49331800 Weak transcription H9 Cell Line embryonic stem cell
14 chr15:49308800-49334400 Weak transcription Psoas Muscle Psoas
15 chr15:49309200-49327600 Weak transcription NHEK skin
16 chr15:49310000-49328400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr15:49313400-49335000 Weak transcription Pancreas Pancrea
18 chr15:49313800-49336400 Weak transcription Placenta Amnion Placenta Amnion
19 chr15:49314200-49329000 Weak transcription Colon Smooth Muscle Colon
20 chr15:49315200-49330000 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr15:49315800-49328600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
22 chr15:49316000-49327600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr15:49316600-49328200 Strong transcription HSMM muscle
24 chr15:49317200-49329600 Strong transcription Placenta Placenta
25 chr15:49317600-49327400 Weak transcription Stomach Mucosa stomach
26 chr15:49317800-49330200 Strong transcription Primary B cells from cord blood blood
27 chr15:49318000-49329200 Strong transcription Primary T regulatory cells fromperipheralblood blood
28 chr15:49318200-49330000 Strong transcription Primary T cells from cord blood blood
29 chr15:49318800-49327200 Weak transcription Fetal Brain Male brain
30 chr15:49319200-49329000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr15:49319200-49334600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr15:49319400-49329600 Weak transcription Brain Germinal Matrix brain
33 chr15:49320200-49336800 Weak transcription H1 Cell Line embryonic stem cell
34 chr15:49320800-49329800 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr15:49320800-49336400 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr15:49321000-49327400 Weak transcription NHLF lung
37 chr15:49321000-49327600 Weak transcription GM12878-XiMat blood
38 chr15:49321000-49328400 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr15:49321000-49336400 Weak transcription iPS-18 Cell Line embryonic stem cell
40 chr15:49321200-49327400 Weak transcription Primary hematopoietic stem cells blood
41 chr15:49321200-49327600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr15:49321200-49327600 Weak transcription Ovary ovary
43 chr15:49321200-49328200 Weak transcription Primary T killer naive cells fromperipheralblood blood
44 chr15:49321200-49328400 Weak transcription Colonic Mucosa Colon
45 chr15:49321200-49329800 Weak transcription Fetal Heart heart
46 chr15:49321400-49327400 Weak transcription Rectal Smooth Muscle rectum
47 chr15:49321400-49338000 Weak transcription Spleen Spleen
48 chr15:49321800-49327400 Weak transcription HUES6 Cell Line embryonic stem cell
49 chr15:49321800-49327400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
50 chr15:49321800-49328000 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015