Variant report

Variant rs116424714
Chromosome Location chr1:10058034-10058035
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10056600-10058400 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
2 chr1:10056800-10058200 Bivalent/Poised TSS Primary T cells from cord blood blood
3 chr1:10056800-10058400 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
4 chr1:10056800-10058400 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
5 chr1:10056800-10058400 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
6 chr1:10056800-10058400 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr1:10056800-10058400 Enhancers Liver Liver
8 chr1:10056800-10058400 Active TSS Brain Anterior Caudate brain
9 chr1:10056800-10058400 Active TSS Pancreatic Islets Pancreatic Islet
10 chr1:10056800-10059000 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
11 chr1:10057000-10058200 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr1:10057000-10058200 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
13 chr1:10057000-10058200 Bivalent/Poised TSS IMR90 fetal lung fibroblasts Cell Line lung
14 chr1:10057000-10058200 Bivalent/Poised TSS iPS DF 6.9 Cell Line embryonic stem cell
15 chr1:10057000-10058200 Bivalent/Poised TSS ES-UCSF4 Cell Line embryonic stem cell
16 chr1:10057000-10058200 Active TSS Primary T helper naive cells fromperipheralblood blood
17 chr1:10057000-10058200 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
18 chr1:10057000-10058200 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr1:10057000-10058200 Active TSS Brain Substantia Nigra brain
20 chr1:10057000-10058200 Bivalent Enhancer Fetal Brain Male brain
21 chr1:10057000-10058200 Active TSS Rectal Mucosa Donor 29 rectum
22 chr1:10057000-10058200 Bivalent/Poised TSS Thymus Thymus
23 chr1:10057000-10058200 Bivalent/Poised TSS A549 lung
24 chr1:10057000-10058200 Bivalent/Poised TSS HepG2 liver
25 chr1:10057000-10058200 Bivalent/Poised TSS HSMM muscle
26 chr1:10057000-10058400 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
27 chr1:10057000-10058400 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
28 chr1:10057000-10058400 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
29 chr1:10057000-10058400 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
30 chr1:10057000-10058400 Flanking Bivalent TSS/Enh iPS DF 19.11 Cell Line embryonic stem cell
31 chr1:10057000-10058400 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
32 chr1:10057000-10058400 Bivalent/Poised TSS Brain Inferior Temporal Lobe brain
33 chr1:10057000-10058400 Bivalent/Poised TSS Colon Smooth Muscle Colon
34 chr1:10057000-10058400 Bivalent/Poised TSS Duodenum Mucosa Duodenum
35 chr1:10057000-10058400 Active TSS Left Ventricle heart
36 chr1:10057000-10058400 Active TSS Ovary ovary
37 chr1:10057000-10058400 Active TSS Right Ventricle heart
38 chr1:10057200-10058200 Bivalent/Poised TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr1:10057200-10058200 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr1:10057200-10058200 Active TSS Brain Cingulate Gyrus brain
41 chr1:10057200-10058200 Bivalent/Poised TSS Fetal Intestine Small intestine
42 chr1:10057200-10058200 Bivalent/Poised TSS Rectal Smooth Muscle rectum
43 chr1:10057200-10058200 Bivalent/Poised TSS NHEK skin
44 chr1:10057200-10058400 Flanking Active TSS Primary B cells from cord blood blood
45 chr1:10057200-10058400 Bivalent/Poised TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr1:10057200-10058400 Flanking Bivalent TSS/Enh Cortex derived primary cultured neurospheres brain
47 chr1:10057200-10058400 Bivalent/Poised TSS Brain Dorsolateral Prefrontal Cortex brain
48 chr1:10057200-10058600 Weak transcription Fetal Heart heart
49 chr1:10057400-10058200 Bivalent/Poised TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr1:10057400-10058200 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin

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