Variant report

Variant	rs116491151
Chromosome Location	chr7:120496971-120496972
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr16:3072484..3075327-chr7:120496877..120499119,2	MCF-7	breast:
2	chr7:120495769..120499665-chr7:120588624..120592417,7	MCF-7	breast:
3	chr7:120494775..120497431-chr7:120590834..120592743,2	K562	blood:

Variant related genes	Relation type
ENSG00000131652	Chromatin interaction
ENSG00000071243	Chromatin interaction
ENSG00000103145	Chromatin interaction

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1818826	chr7:120405335-120622836	Strong transcription Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
2	nsv5929	chr7:120467591-120513472	Enhancers Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
3	esv3438279	chr7:120496341-120498889	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:121 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:120494400-120498200	Active TSS	GM12878-XiMat	blood
2	chr7:120495800-120498600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr7:120495800-120498600	Active TSS	Left Ventricle	heart
4	chr7:120496000-120497000	Flanking Active TSS	Fetal Intestine Large	intestine
5	chr7:120496000-120499000	Active TSS	Fetal Kidney	kidney
6	chr7:120496200-120498800	Active TSS	Aorta	Aorta
7	chr7:120496200-120498800	Active TSS	Colon Smooth Muscle	Colon
8	chr7:120496200-120499000	Active TSS	Right Ventricle	heart
9	chr7:120496400-120497000	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
10	chr7:120496400-120498600	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr7:120496400-120498600	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr7:120496400-120498800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr7:120496400-120498800	Active TSS	HUES6 Cell Line	embryonic stem cell
14	chr7:120496400-120498800	Active TSS	Stomach Smooth Muscle	stomach
15	chr7:120496600-120497000	Flanking Active TSS	H1 Cell Line	embryonic stem cell
16	chr7:120496600-120497000	Flanking Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr7:120496600-120497000	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr7:120496600-120497000	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr7:120496600-120497000	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
20	chr7:120496600-120497000	Bivalent Enhancer	Primary B cells from peripheral blood	blood
21	chr7:120496600-120497000	Bivalent/Poised TSS	Primary T cells from cord blood	blood
22	chr7:120496600-120497000	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
23	chr7:120496600-120497000	Bivalent Enhancer	Primary hematopoietic stem cells short term culture	blood
24	chr7:120496600-120497000	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
25	chr7:120496600-120497000	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr7:120496600-120497000	Flanking Active TSS	Muscle Satellite Cultured Cells	--
27	chr7:120496600-120497000	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
28	chr7:120496600-120497000	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin01	Skin
29	chr7:120496600-120497000	Flanking Bivalent TSS/Enh	Brain Cingulate Gyrus	brain
30	chr7:120496600-120497000	Flanking Active TSS	Duodenum Mucosa	Duodenum
31	chr7:120496600-120497000	Flanking Bivalent TSS/Enh	Fetal Adrenal Gland	Adrenal Gland
32	chr7:120496600-120497000	Flanking Bivalent TSS/Enh	Fetal Brain Female	brain
33	chr7:120496600-120497000	Flanking Active TSS	Fetal Lung	lung
34	chr7:120496600-120497000	Flanking Bivalent TSS/Enh	Fetal Muscle Leg	muscle
35	chr7:120496600-120497000	Flanking Active TSS	Gastric	stomach
36	chr7:120496600-120497000	Flanking Active TSS	Ovary	ovary
37	chr7:120496600-120497000	Flanking Active TSS	Rectal Smooth Muscle	rectum
38	chr7:120496600-120497000	Bivalent Enhancer	Sigmoid Colon	Sigmoid Colon
39	chr7:120496600-120497000	Flanking Active TSS	Stomach Mucosa	stomach
40	chr7:120496600-120497200	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
41	chr7:120496600-120497200	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
42	chr7:120496600-120497200	Flanking Bivalent TSS/Enh	Foreskin Keratinocyte Primary Cells skin03	Skin
43	chr7:120496600-120497200	Flanking Bivalent TSS/Enh	Brain Germinal Matrix	brain
44	chr7:120496600-120497200	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
45	chr7:120496600-120497200	Flanking Active TSS	Fetal Intestine Small	intestine
46	chr7:120496600-120497200	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
47	chr7:120496600-120497200	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
48	chr7:120496600-120497200	Bivalent/Poised TSS	A549	lung
49	chr7:120496600-120497200	Flanking Active TSS	HUVEC	blood vessel
50	chr7:120496600-120497200	Flanking Active TSS	NH-A	brain

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