The 2.0 version of rSNPBase

Variant report

Variant rs11654208
Chromosome Location chr17:38196493-38196494
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:38186600-38209800 Weak transcription Small Intestine intestine
2 chr17:38188800-38209400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr17:38189600-38206600 Weak transcription H9 Cell Line embryonic stem cell
4 chr17:38189600-38209600 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr17:38189600-38209600 Weak transcription Psoas Muscle Psoas
6 chr17:38190600-38209600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr17:38191000-38208800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr17:38191400-38201000 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr17:38191800-38206000 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr17:38192000-38209600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr17:38192200-38206600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr17:38192200-38209400 Weak transcription Fetal Brain Male brain
13 chr17:38192200-38209600 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr17:38192400-38199000 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr17:38192400-38209600 Weak transcription Primary T killer naive cells fromperipheralblood blood
16 chr17:38192400-38209600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr17:38192400-38209600 Weak transcription Colonic Mucosa Colon
18 chr17:38192400-38209800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr17:38192400-38210000 Weak transcription Placenta Amnion Placenta Amnion
20 chr17:38192600-38197400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr17:38192600-38197400 Weak transcription Primary B cells from peripheral blood blood
22 chr17:38192600-38197600 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr17:38192600-38197600 Weak transcription Monocytes-CD14+_RO01746 blood
24 chr17:38192600-38198200 Weak transcription Primary T regulatory cells fromperipheralblood blood
25 chr17:38192600-38198400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr17:38192600-38198600 Weak transcription GM12878-XiMat blood
27 chr17:38192600-38198800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr17:38192600-38198800 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr17:38192600-38199200 Weak transcription Gastric stomach
30 chr17:38192600-38201400 Weak transcription Lung lung
31 chr17:38192600-38201800 Weak transcription Fetal Brain Female brain
32 chr17:38192600-38203200 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr17:38192600-38205600 Weak transcription Spleen Spleen
34 chr17:38192600-38206600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr17:38192600-38206600 Weak transcription Primary T helper cells PMA-I stimulated --
36 chr17:38192600-38208600 Weak transcription NHEK skin
37 chr17:38192600-38209400 Weak transcription Primary hematopoietic stem cells blood
38 chr17:38192600-38209800 Weak transcription Aorta Aorta
39 chr17:38192800-38198800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr17:38193200-38197600 Weak transcription Primary monocytes fromperipheralblood blood
41 chr17:38193200-38199200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr17:38193200-38199400 Weak transcription Primary T cells fromperipheralblood blood
43 chr17:38193200-38199400 Weak transcription Primary T helper naive cells fromperipheralblood blood
44 chr17:38193200-38203200 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr17:38193200-38203200 Weak transcription Dnd41 blood
46 chr17:38193400-38196600 Weak transcription Fetal Intestine Large intestine
47 chr17:38193400-38197400 Weak transcription Primary B cells from cord blood blood
48 chr17:38193600-38208600 Weak transcription K562 blood
49 chr17:38193800-38199200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr17:38193800-38199200 Weak transcription Thymus Thymus

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Last update: Aug 31, 2015