Variant report

Variant	rs11656443
Chromosome Location	chr17:34038557-34038558
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr17:34037578..34041296-chr17:34042610..34046006,5	K562	blood:
2	chr17:34024050..34027708-chr17:34038047..34041626,3	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs9906309	0.82[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534371	chr17:33456878-34094068	Strong transcription Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	137 gene(s)	inside rSNPs	diseases
2	nsv908080	chr17:34027964-34054044	Genic enhancers Enhancers Weak transcription Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:33931000-34040200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr17:33968000-34055800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr17:33999400-34043400	Weak transcription	Fetal Brain Male	brain
4	chr17:34006600-34039800	Weak transcription	Small Intestine	intestine
5	chr17:34017800-34040400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr17:34018800-34050600	Weak transcription	Esophagus	oesophagus
7	chr17:34019000-34044000	Weak transcription	Placenta Amnion	Placenta Amnion
8	chr17:34022200-34042400	Weak transcription	Aorta	Aorta
9	chr17:34023200-34043800	Weak transcription	Spleen	Spleen
10	chr17:34023200-34044000	Weak transcription	H9 Cell Line	embryonic stem cell
11	chr17:34023200-34051600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
12	chr17:34023400-34044200	Weak transcription	Brain Germinal Matrix	brain
13	chr17:34023800-34039000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr17:34024200-34056200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
15	chr17:34026600-34039600	Weak transcription	HSMMtube	muscle
16	chr17:34026600-34050200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
17	chr17:34032600-34055800	Strong transcription	Monocytes-CD14+_RO01746	blood
18	chr17:34034600-34041000	Strong transcription	Dnd41	blood
19	chr17:34034800-34053400	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr17:34034800-34055600	Strong transcription	Primary monocytes fromperipheralblood	blood
21	chr17:34035000-34039600	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr17:34035400-34039200	Strong transcription	HSMM	muscle
23	chr17:34035400-34056200	Strong transcription	A549	lung
24	chr17:34035800-34039000	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr17:34035800-34039200	Strong transcription	Primary T cells fromperipheralblood	blood
26	chr17:34035800-34039600	Strong transcription	Sigmoid Colon	Sigmoid Colon
27	chr17:34035800-34040000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
28	chr17:34035800-34053000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
29	chr17:34036000-34038600	Strong transcription	H1 Cell Line	embryonic stem cell
30	chr17:34036000-34038600	Strong transcription	Thymus	Thymus
31	chr17:34036000-34038800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
32	chr17:34036000-34039000	Strong transcription	Ovary	ovary
33	chr17:34036000-34039000	Strong transcription	Osteobl	bone
34	chr17:34036000-34039200	Strong transcription	Fetal Intestine Large	intestine
35	chr17:34036000-34039400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
36	chr17:34036000-34039400	Strong transcription	Fetal Thymus	thymus
37	chr17:34036000-34039600	Strong transcription	Fetal Muscle Leg	muscle
38	chr17:34036000-34039800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
39	chr17:34036000-34040000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
40	chr17:34036000-34040000	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
41	chr17:34036000-34040000	Strong transcription	HUES6 Cell Line	embryonic stem cell
42	chr17:34036000-34040800	Strong transcription	K562	blood
43	chr17:34036000-34041800	Strong transcription	Fetal Stomach	stomach
44	chr17:34036000-34045800	Strong transcription	Fetal Muscle Trunk	muscle
45	chr17:34036000-34047400	Strong transcription	HUES48 Cell Line	embryonic stem cell
46	chr17:34036000-34049000	Strong transcription	HUES64 Cell Line	embryonic stem cell
47	chr17:34036000-34055600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
48	chr17:34036200-34038600	Strong transcription	HUVEC	blood vessel
49	chr17:34036200-34039200	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
50	chr17:34036200-34039600	Strong transcription	Duodenum Smooth Muscle	Duodenum

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