Variant report
| Variant | rs11657954 |
|---|---|
| Chromosome Location | chr17:67080770-67080771 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr17:67065600-67088600 | Weak transcription | Pancreas | Pancrea |
| 2 | chr17:67067200-67099600 | Weak transcription | Gastric | stomach |
| 3 | chr17:67067200-67111600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 4 | chr17:67071800-67091400 | Weak transcription | Brain Anterior Caudate | brain |
| 5 | chr17:67074600-67083800 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
| 6 | chr17:67075200-67081200 | Strong transcription | Skeletal Muscle Male | skeletal muscle |
| 7 | chr17:67075600-67085600 | Strong transcription | Fetal Lung | lung |
| 8 | chr17:67076800-67109800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 9 | chr17:67077600-67082600 | Weak transcription | Brain Angular Gyrus | brain |
| 10 | chr17:67077800-67137800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 11 | chr17:67078000-67081200 | Strong transcription | Fetal Muscle Leg | muscle |
| 12 | chr17:67078400-67081200 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 13 | chr17:67078600-67080800 | ZNF genes & repeats | GM12878-XiMat | blood |
| 14 | chr17:67078600-67081200 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 15 | chr17:67078600-67081400 | Strong transcription | Stomach Smooth Muscle | stomach |
| 16 | chr17:67078800-67081000 | Weak transcription | Spleen | Spleen |
| 17 | chr17:67079000-67082600 | Weak transcription | Colonic Mucosa | Colon |
| 18 | chr17:67079400-67081000 | Weak transcription | Right Ventricle | heart |
| 19 | chr17:67079400-67081400 | Strong transcription | Ovary | ovary |
| 20 | chr17:67079400-67081800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 21 | chr17:67079400-67084200 | Strong transcription | Adipose Nuclei | Adipose |
| 22 | chr17:67079400-67087400 | Weak transcription | Colon Smooth Muscle | Colon |
| 23 | chr17:67079400-67090600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 24 | chr17:67079400-67093600 | Weak transcription | Fetal Stomach | stomach |
| 25 | chr17:67079400-67095600 | Weak transcription | Psoas Muscle | Psoas |
| 26 | chr17:67079400-67112200 | Strong transcription | Liver | Liver |
| 27 | chr17:67079400-67112600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 28 | chr17:67079400-67117600 | Weak transcription | Esophagus | oesophagus |
| 29 | chr17:67079600-67081200 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 30 | chr17:67079600-67081600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 31 | chr17:67079600-67091600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 32 | chr17:67079600-67101200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 33 | chr17:67079600-67114200 | Weak transcription | NHDF-Ad | bronchial |
| 34 | chr17:67080000-67085000 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 35 | chr17:67080200-67080800 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 36 | chr17:67080200-67080800 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 37 | chr17:67080400-67080800 | Active TSS | Brain Substantia Nigra | brain |
| 38 | chr17:67080400-67080800 | Strong transcription | Duodenum Smooth Muscle | Duodenum |
| 39 | chr17:67080400-67081400 | ZNF genes & repeats | Left Ventricle | heart |
| 40 | chr17:67080600-67083600 | Weak transcription | Lung | lung |
| 41 | chr17:67080600-67086600 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
