The 2.0 version of rSNPBase

Variant report

Variant rs11659200
Chromosome Location chr18:43822042-43822043
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:43796600-43827600 Weak transcription Fetal Muscle Leg muscle
2 chr18:43797000-43833400 Weak transcription Fetal Muscle Trunk muscle
3 chr18:43797400-43829600 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr18:43798800-43833800 Weak transcription HepG2 liver
5 chr18:43799000-43834000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr18:43800800-43829000 Weak transcription HSMM muscle
7 chr18:43801200-43829600 Weak transcription Thymus Thymus
8 chr18:43802800-43828200 Weak transcription Primary B cells from peripheral blood blood
9 chr18:43802800-43830000 Weak transcription Brain Substantia Nigra brain
10 chr18:43803600-43827800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr18:43804400-43825200 Weak transcription Hela-S3 cervix
12 chr18:43804600-43825200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr18:43804800-43829400 Weak transcription Primary hematopoietic stem cells blood
14 chr18:43805200-43828200 Weak transcription GM12878-XiMat blood
15 chr18:43805400-43827600 Weak transcription Fetal Thymus thymus
16 chr18:43805400-43829800 Weak transcription Fetal Intestine Large intestine
17 chr18:43805600-43826200 Weak transcription Fetal Stomach stomach
18 chr18:43806200-43826200 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr18:43806400-43827600 Weak transcription Duodenum Mucosa Duodenum
20 chr18:43806400-43829000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr18:43808200-43828800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr18:43810000-43829000 Weak transcription Esophagus oesophagus
23 chr18:43810200-43825200 Weak transcription Primary T cells fromperipheralblood blood
24 chr18:43810200-43828000 Weak transcription Lung lung
25 chr18:43810200-43829400 Weak transcription Fetal Intestine Small intestine
26 chr18:43810200-43832400 Weak transcription Aorta Aorta
27 chr18:43810400-43827800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr18:43815200-43830000 Weak transcription Brain Cingulate Gyrus brain
29 chr18:43815400-43823000 Weak transcription NHDF-Ad bronchial
30 chr18:43815400-43828800 Weak transcription Psoas Muscle Psoas
31 chr18:43815400-43828800 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr18:43815400-43829000 Weak transcription Right Ventricle heart
33 chr18:43815400-43829400 Weak transcription Left Ventricle heart
34 chr18:43815400-43830000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr18:43815400-43830000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr18:43815400-43830200 Weak transcription Gastric stomach
37 chr18:43815600-43823400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr18:43815600-43829000 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr18:43815600-43829600 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr18:43815600-43829600 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr18:43815800-43823600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
42 chr18:43815800-43826200 Weak transcription Primary T helper naive cells from peripheral blood blood
43 chr18:43815800-43827600 Weak transcription Primary B cells from cord blood blood
44 chr18:43815800-43827600 Weak transcription Primary T killer naive cells fromperipheralblood blood
45 chr18:43815800-43829000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr18:43815800-43829000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr18:43815800-43829400 Weak transcription Rectal Smooth Muscle rectum
48 chr18:43815800-43830000 Weak transcription Brain Angular Gyrus brain
49 chr18:43816800-43823200 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr18:43816800-43829400 Weak transcription Primary T regulatory cells fromperipheralblood blood

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Last update: Aug 31, 2015