Variant report

Variant	rs116614360
Chromosome Location	chr8:88760502-88760503
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891167	chr8:88600593-88846956	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv831384	chr8:88746718-88917248	Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv968516	chr8:88754170-88760731	Active TSS Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:88759600-88761200	Enhancers	iPS-18 Cell Line	embryonic stem cell
2	chr8:88759800-88760600	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr8:88759800-88760800	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr8:88760000-88763000	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr8:88760000-88766200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr8:88760000-88768000	Weak transcription	H1 Cell Line	embryonic stem cell
7	chr8:88760000-88770600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr8:88760200-88760600	Active TSS	iPS-20b Cell Line	embryonic stem cell
9	chr8:88760200-88760800	Enhancers	HUES64 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links