The 2.0 version of rSNPBase

Variant report

Variant rs11662531
Chromosome Location chr18:12633909-12633910
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:12597800-12634600 Weak transcription Aorta Aorta
2 chr18:12602200-12638400 Weak transcription Fetal Brain Female brain
3 chr18:12607000-12640200 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr18:12607800-12651800 Weak transcription Brain Germinal Matrix brain
5 chr18:12616400-12640400 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr18:12616400-12644800 Weak transcription Brain Hippocampus Middle brain
7 chr18:12616600-12645200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr18:12621200-12645200 Weak transcription Fetal Muscle Leg muscle
9 chr18:12622800-12645000 Weak transcription Brain Angular Gyrus brain
10 chr18:12624000-12637600 Weak transcription Left Ventricle heart
11 chr18:12625400-12640400 Weak transcription Fetal Adrenal Gland Adrenal Gland
12 chr18:12626600-12640600 Weak transcription Lung lung
13 chr18:12629800-12638400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr18:12629800-12640400 Weak transcription HSMMtube muscle
15 chr18:12630400-12645400 Weak transcription Ovary ovary
16 chr18:12630800-12637600 Weak transcription HMEC breast
17 chr18:12630800-12637600 Weak transcription NH-A brain
18 chr18:12630800-12640600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr18:12631000-12637200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr18:12631000-12637400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr18:12631000-12637600 Weak transcription HSMM muscle
22 chr18:12631000-12638000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr18:12631000-12638600 Weak transcription Brain Inferior Temporal Lobe brain
24 chr18:12631000-12640400 Weak transcription Stomach Smooth Muscle stomach
25 chr18:12631000-12645200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr18:12631000-12645200 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr18:12631200-12636800 Weak transcription Osteobl bone
28 chr18:12631200-12637200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr18:12631200-12637400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr18:12631200-12637800 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr18:12631200-12640400 Weak transcription Brain Cingulate Gyrus brain
32 chr18:12631200-12647800 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr18:12631400-12645200 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr18:12632400-12634400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr18:12632400-12637600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr18:12632600-12637600 Weak transcription K562 blood
37 chr18:12632800-12635200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr18:12633200-12637000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr18:12633400-12637800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr18:12633600-12637200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr18:12633600-12638000 Weak transcription HUVEC blood vessel
42 chr18:12633600-12655800 Weak transcription Fetal Stomach stomach
43 chr18:12633800-12637600 Weak transcription NHEK skin

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Last update: Aug 31, 2015