Variant report
| Variant | rs1168771 |
|---|---|
| Chromosome Location | chr12:66588836-66588837 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:66583600-66589000 | Weak transcription | Brain Substantia Nigra | brain |
| 2 | chr12:66583600-66589000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 3 | chr12:66583600-66591400 | Weak transcription | Osteobl | bone |
| 4 | chr12:66583800-66589000 | Weak transcription | Placenta | Placenta |
| 5 | chr12:66583800-66593000 | Weak transcription | Aorta | Aorta |
| 6 | chr12:66583800-66623400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 7 | chr12:66585000-66590000 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 8 | chr12:66585000-66591000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 9 | chr12:66585000-66591400 | Weak transcription | Colon Smooth Muscle | Colon |
| 10 | chr12:66585200-66589000 | Weak transcription | Right Ventricle | heart |
| 11 | chr12:66585400-66589200 | Weak transcription | HUVEC | blood vessel |
| 12 | chr12:66585600-66589000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 13 | chr12:66585600-66589000 | Weak transcription | Left Ventricle | heart |
| 14 | chr12:66585600-66590400 | Weak transcription | Esophagus | oesophagus |
| 15 | chr12:66585600-66590800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 16 | chr12:66585600-66592000 | Weak transcription | Right Atrium | heart |
| 17 | chr12:66585800-66589000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 18 | chr12:66585800-66590200 | Weak transcription | Fetal Kidney | kidney |
| 19 | chr12:66586000-66589000 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 20 | chr12:66586000-66589000 | Weak transcription | Gastric | stomach |
| 21 | chr12:66586000-66589600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 22 | chr12:66587200-66589200 | Genic enhancers | Primary hematopoietic stem cells short term culture | blood |
| 23 | chr12:66587200-66589400 | Genic enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 24 | chr12:66587200-66590400 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 25 | chr12:66587400-66589400 | Genic enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 26 | chr12:66587400-66591800 | Enhancers | Primary B cells from cord blood | blood |
| 27 | chr12:66587600-66589000 | Enhancers | GM12878-XiMat | blood |
| 28 | chr12:66587800-66589000 | Strong transcription | Lung | lung |
| 29 | chr12:66587800-66589200 | Weak transcription | Adipose Nuclei | Adipose |
| 30 | chr12:66588000-66590000 | Genic enhancers | Primary monocytes fromperipheralblood | blood |
| 31 | chr12:66588400-66589000 | Genic enhancers | Primary neutrophils fromperipheralblood | blood |
| 32 | chr12:66588600-66590200 | Transcr. at gene 5' and 3' | Monocytes-CD14+_RO01746 | blood |
| 33 | chr12:66588800-66589000 | Active TSS | Primary hematopoietic stem cells | blood |
| 34 | chr12:66588800-66589400 | Genic enhancers | Fetal Lung | lung |
| 35 | chr12:66588800-66589600 | Enhancers | Spleen | Spleen |
| 36 | chr12:66588800-66590400 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 37 | chr12:66588800-66591400 | Enhancers | Stomach Mucosa | stomach |
