Variant report

Variant	rs116906610
Chromosome Location	chr11:86303752-86303753
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:86299123..86300759-chr11:86301620..86304083,2	K562	blood:
2	chr11:86302794..86305608-chr11:86317191..86320162,2	K562	blood:

Extended variants
information (count: 15 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:15 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1044081	chr11:86133641-86868560	Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
2	nsv541118	chr11:86133641-86868560	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
3	nsv898056	chr11:86156848-86304402	Weak transcription Genic enhancers Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
4	nsv555665	chr11:86230898-86417553	Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
5	nsv555678	chr11:86285994-86305977	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv1055071	chr11:86301240-86465465	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
7	esv3463753	chr11:86302304-86308102	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv11399	chr11:86303268-86306521	Flanking Active TSS Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
9	nsv555685	chr11:86303326-86306375	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
10	nsv8852	chr11:86303499-86306788	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
11	nsv826012	chr11:86303668-86306764	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
12	nsv826013	chr11:86303714-86306339	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
13	nsv826014	chr11:86303714-86306764	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
14	nsv826015	chr11:86303746-86306339	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
15	nsv826016	chr11:86303746-86306764	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:100 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:86292000-86303800	Weak transcription	Ovary	ovary
2	chr11:86292800-86303800	Weak transcription	Gastric	stomach
3	chr11:86293400-86303800	Weak transcription	Aorta	Aorta
4	chr11:86294200-86303800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr11:86297400-86308000	Weak transcription	Fetal Muscle Trunk	muscle
6	chr11:86298000-86307000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr11:86298200-86304600	Enhancers	Skeletal Muscle Female	skeletal muscle
8	chr11:86298200-86307400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr11:86298800-86304400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr11:86299200-86304600	Enhancers	Skeletal Muscle Male	skeletal muscle
11	chr11:86299400-86304800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr11:86300000-86303800	Weak transcription	Spleen	Spleen
13	chr11:86300000-86304000	Weak transcription	Brain Cingulate Gyrus	brain
14	chr11:86300200-86303800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
15	chr11:86300200-86303800	Weak transcription	Small Intestine	intestine
16	chr11:86300200-86305400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr11:86300200-86308200	Weak transcription	Fetal Brain Male	brain
18	chr11:86300200-86318800	Weak transcription	Esophagus	oesophagus
19	chr11:86300400-86303800	Weak transcription	Adipose Nuclei	Adipose
20	chr11:86300600-86304200	Enhancers	Placenta Amnion	Placenta Amnion
21	chr11:86300800-86304400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr11:86300800-86308800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
23	chr11:86301000-86303800	Weak transcription	Right Atrium	heart
24	chr11:86301600-86304800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
25	chr11:86301600-86307000	Enhancers	ES-I3 Cell Line	embryonic stem cell
26	chr11:86301800-86304000	Enhancers	Fetal Intestine Small	intestine
27	chr11:86302000-86303800	Weak transcription	Left Ventricle	heart
28	chr11:86302000-86303800	Weak transcription	Lung	lung
29	chr11:86302000-86303800	Weak transcription	Pancreas	Pancrea
30	chr11:86302200-86304000	Enhancers	Fetal Intestine Large	intestine
31	chr11:86302200-86304600	Enhancers	iPS-18 Cell Line	embryonic stem cell
32	chr11:86302200-86309000	Enhancers	HUVEC	blood vessel
33	chr11:86302400-86304800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
34	chr11:86302400-86306600	Enhancers	HUES64 Cell Line	embryonic stem cell
35	chr11:86302400-86306800	Enhancers	HMEC	breast
36	chr11:86302600-86303800	Weak transcription	Fetal Heart	heart
37	chr11:86302600-86304000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
38	chr11:86302600-86304200	Enhancers	Psoas Muscle	Psoas
39	chr11:86302600-86307000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
40	chr11:86302800-86304400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
41	chr11:86302800-86304400	Enhancers	Fetal Lung	lung
42	chr11:86302800-86304600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
43	chr11:86302800-86304800	Enhancers	HUES48 Cell Line	embryonic stem cell
44	chr11:86303000-86303800	Enhancers	Muscle Satellite Cultured Cells	--
45	chr11:86303000-86303800	Enhancers	GM12878-XiMat	blood
46	chr11:86303000-86303800	Enhancers	Hela-S3	cervix
47	chr11:86303000-86303800	Enhancers	Osteobl	bone
48	chr11:86303000-86304200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
49	chr11:86303000-86304400	Enhancers	Breast Myoepithelial Primary Cells	Breast
50	chr11:86303000-86304400	Enhancers	HSMMtube	muscle

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