Variant report

Variant rs116936153
Chromosome Location chr15:56530148-56530149
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56508000-56534400 Weak transcription Fetal Heart heart
2 chr15:56509000-56533600 Weak transcription Osteobl bone
3 chr15:56513800-56530200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
4 chr15:56514000-56535000 Weak transcription Pancreas Pancrea
5 chr15:56514600-56532400 Weak transcription HSMMtube muscle
6 chr15:56514800-56534800 Weak transcription Placenta Amnion Placenta Amnion
7 chr15:56520200-56530200 ZNF genes & repeats Dnd41 blood
8 chr15:56521400-56532000 ZNF genes & repeats GM12878-XiMat blood
9 chr15:56522800-56533600 Weak transcription Stomach Smooth Muscle stomach
10 chr15:56524600-56532000 Weak transcription NHEK skin
11 chr15:56524600-56532400 Weak transcription HSMM muscle
12 chr15:56524600-56533800 Weak transcription Aorta Aorta
13 chr15:56524600-56534800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr15:56524800-56531800 Weak transcription NH-A brain
15 chr15:56524800-56532000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr15:56524800-56533600 Weak transcription Brain Hippocampus Middle brain
17 chr15:56524800-56533600 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr15:56524800-56533800 Weak transcription Ovary ovary
19 chr15:56524800-56534800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr15:56524800-56534800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
21 chr15:56524800-56534800 Weak transcription Rectal Smooth Muscle rectum
22 chr15:56524800-56534800 Weak transcription Small Intestine intestine
23 chr15:56524800-56535000 Weak transcription Esophagus oesophagus
24 chr15:56525000-56533400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr15:56525000-56533600 Weak transcription Primary T cells fromperipheralblood blood
26 chr15:56525200-56531000 Weak transcription Left Ventricle heart
27 chr15:56525200-56531200 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr15:56525400-56533600 Weak transcription Brain Substantia Nigra brain
29 chr15:56525400-56534800 Weak transcription Placenta Placenta
30 chr15:56525400-56535000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr15:56525600-56532400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr15:56525600-56533600 Weak transcription Fetal Stomach stomach
33 chr15:56525600-56535000 Weak transcription Lung lung
34 chr15:56525800-56532000 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr15:56525800-56533200 Weak transcription Primary monocytes fromperipheralblood blood
36 chr15:56525800-56533400 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr15:56525800-56533800 Weak transcription Fetal Muscle Leg muscle
38 chr15:56526000-56532400 Weak transcription Brain Germinal Matrix brain
39 chr15:56526000-56532400 Weak transcription NHDF-Ad bronchial
40 chr15:56526000-56533400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
41 chr15:56526000-56533400 Weak transcription Fetal Intestine Small intestine
42 chr15:56526000-56533400 Weak transcription Thymus Thymus
43 chr15:56526000-56533600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr15:56526000-56533600 Weak transcription Brain Angular Gyrus brain
45 chr15:56526000-56533600 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr15:56526200-56532400 Weak transcription Fetal Lung lung
47 chr15:56526200-56533200 Weak transcription Hela-S3 cervix
48 chr15:56526200-56534200 Weak transcription Fetal Intestine Large intestine
49 chr15:56526400-56532400 Weak transcription Primary T cells from cord blood blood
50 chr15:56526400-56533600 Weak transcription HepG2 liver

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