Variant report

Variant rs11702822
Chromosome Location chr21:47877368-47877369
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:47845600-47877400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr21:47858400-47877400 Weak transcription Stomach Mucosa stomach
3 chr21:47864600-47877800 Weak transcription Aorta Aorta
4 chr21:47870200-47877400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr21:47870200-47877400 Weak transcription H9 Cell Line embryonic stem cell
6 chr21:47873400-47877400 Weak transcription Fetal Kidney kidney
7 chr21:47873800-47877400 Enhancers Brain Substantia Nigra brain
8 chr21:47874000-47877400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr21:47874000-47877400 Enhancers Colon Smooth Muscle Colon
10 chr21:47874000-47877400 Enhancers Right Atrium heart
11 chr21:47874000-47877600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
12 chr21:47874200-47877400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
13 chr21:47874200-47877400 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr21:47874200-47877400 Enhancers Rectal Smooth Muscle rectum
15 chr21:47874600-47877400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr21:47874600-47877400 Enhancers Adipose Nuclei Adipose
17 chr21:47874600-47877600 Enhancers Liver Liver
18 chr21:47875000-47877400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
19 chr21:47875000-47877400 Enhancers Colonic Mucosa Colon
20 chr21:47875200-47877400 Enhancers NHDF-Ad bronchial
21 chr21:47875400-47877400 Enhancers NHLF lung
22 chr21:47875600-47877400 Enhancers Duodenum Mucosa Duodenum
23 chr21:47875600-47877400 Genic enhancers Fetal Stomach stomach
24 chr21:47875600-47877400 Enhancers Rectal Mucosa Donor 31 rectum
25 chr21:47875600-47877600 Enhancers Esophagus oesophagus
26 chr21:47875600-47877600 Enhancers Pancreas Pancrea
27 chr21:47875600-47877800 Enhancers Sigmoid Colon Sigmoid Colon
28 chr21:47875600-47877800 Enhancers Spleen Spleen
29 chr21:47875800-47877400 Enhancers Primary T killer naive cells fromperipheralblood blood
30 chr21:47875800-47878000 Flanking Active TSS Fetal Heart heart
31 chr21:47875800-47878600 Flanking Active TSS Skeletal Muscle Female skeletal muscle
32 chr21:47876000-47877600 Enhancers HUVEC blood vessel
33 chr21:47876000-47877800 Enhancers Small Intestine intestine
34 chr21:47876200-47877400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
35 chr21:47876200-47877400 Enhancers Primary T helper naive cells from peripheral blood blood
36 chr21:47876200-47877400 Enhancers Primary T helper cells PMA-I stimulated --
37 chr21:47876200-47877400 Enhancers Primary T regulatory cells fromperipheralblood blood
38 chr21:47876200-47877400 Enhancers Brain Cingulate Gyrus brain
39 chr21:47876200-47877400 Enhancers Brain Inferior Temporal Lobe brain
40 chr21:47876200-47877600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
41 chr21:47876200-47877600 Enhancers Primary T helper naive cells fromperipheralblood blood
42 chr21:47876200-47877800 Enhancers Lung lung
43 chr21:47876400-47877400 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr21:47876400-47877400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr21:47876400-47877400 Weak transcription HSMM muscle
46 chr21:47876400-47877400 Weak transcription NH-A brain
47 chr21:47876400-47877400 Weak transcription Osteobl bone
48 chr21:47876400-47877600 Weak transcription HSMMtube muscle
49 chr21:47876400-47877800 Flanking Active TSS GM12878-XiMat blood
50 chr21:47876600-47877600 Enhancers Primary B cells from cord blood blood

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