Variant report

Variant rs11703490
Chromosome Location chr22:23466969-23466970
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:23439000-23470400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr22:23441800-23470600 Weak transcription Colon Smooth Muscle Colon
3 chr22:23442600-23470600 Weak transcription Pancreas Pancrea
4 chr22:23453200-23484800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr22:23455200-23470400 Weak transcription Fetal Intestine Small intestine
6 chr22:23456200-23470000 Weak transcription Left Ventricle heart
7 chr22:23456200-23472400 Strong transcription Right Atrium heart
8 chr22:23457600-23470200 Weak transcription HSMM muscle
9 chr22:23457600-23470400 Weak transcription HSMMtube muscle
10 chr22:23460800-23470400 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr22:23461200-23469400 Weak transcription Fetal Brain Male brain
12 chr22:23462200-23470800 Weak transcription Primary B cells from cord blood blood
13 chr22:23462400-23468800 Strong transcription Fetal Brain Female brain
14 chr22:23462400-23470400 Weak transcription Primary B cells from peripheral blood blood
15 chr22:23462600-23467400 Strong transcription Fetal Stomach stomach
16 chr22:23462800-23467000 Weak transcription Gastric stomach
17 chr22:23462800-23470400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr22:23463600-23467000 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr22:23463800-23468000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
20 chr22:23464600-23469200 Strong transcription Brain Germinal Matrix brain
21 chr22:23464800-23468000 Strong transcription Breast Myoepithelial Primary Cells Breast
22 chr22:23465400-23467800 Strong transcription Stomach Smooth Muscle stomach
23 chr22:23465600-23468000 Strong transcription Brain Anterior Caudate brain
24 chr22:23465600-23469200 Weak transcription Brain Substantia Nigra brain
25 chr22:23466000-23470400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr22:23466200-23467200 Strong transcription Brain Cingulate Gyrus brain
27 chr22:23466200-23467200 Strong transcription Brain Inferior Temporal Lobe brain
28 chr22:23466200-23468000 Weak transcription Brain Angular Gyrus brain
29 chr22:23466200-23468800 Weak transcription Spleen Spleen
30 chr22:23466200-23469000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr22:23466200-23469400 Weak transcription Brain Hippocampus Middle brain
32 chr22:23466200-23470400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr22:23466200-23470400 Weak transcription HepG2 liver
34 chr22:23466800-23467000 Enhancers ES-I3 Cell Line embryonic stem cell
35 chr22:23466800-23467000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
36 chr22:23466800-23467000 Active TSS Adipose Nuclei Adipose
37 chr22:23466800-23467000 Flanking Bivalent TSS/Enh K562 blood
38 chr22:23466800-23467200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr22:23466800-23467200 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
40 chr22:23466800-23467200 Flanking Active TSS Ovary ovary
41 chr22:23466800-23467200 Enhancers Rectal Smooth Muscle rectum
42 chr22:23466800-23467400 Enhancers Fetal Muscle Trunk muscle
43 chr22:23466800-23467400 Enhancers Fetal Muscle Leg muscle

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