| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv869548 |
chr3:120320731-121076337 |
Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
25 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv916869 |
chr3:120360281-120973169 |
Active TSS Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
22 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1005275 |
chr3:120700604-121102735 |
Strong transcription ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv998555 |
chr3:120700604-121348015 |
Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
19 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv1008441 |
chr3:120730017-121102735 |
Enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv536709 |
chr3:120730017-121102735 |
Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent/Poised TSS Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv1005525 |
chr3:120749594-121027161 |
ZNF genes & repeats Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv1012777 |
chr3:120883846-120974864 |
Enhancers Strong transcription Active TSS ZNF genes & repeats Weak transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 9 |
nsv829701 |
chr3:120935402-121115932 |
Weak transcription Enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
esv3324479 |
chr3:120935887-120938435 |
Enhancers Weak transcription Strong transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 11 |
esv3385451 |
chr3:120936162-120938210 |
Enhancers Weak transcription Strong transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:11 , 50 per page) page:
1
