Variant report

Variant	rs117309706
Chromosome Location	chr7:141065188-141065189
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831160	chr7:141009011-141188046	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	esv34135	chr7:141047454-141492898	Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	61 gene(s)	inside rSNPs	diseases
3	esv3429325	chr7:141064185-141196253	Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:47 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:141055200-141065600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr7:141055400-141065800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr7:141055400-141065800	Weak transcription	Brain Germinal Matrix	brain
4	chr7:141059400-141067800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr7:141062400-141065400	Weak transcription	Brain Substantia Nigra	brain
6	chr7:141062600-141081800	Weak transcription	Fetal Brain Female	brain
7	chr7:141062800-141065600	Weak transcription	Colon Smooth Muscle	Colon
8	chr7:141062800-141065800	Weak transcription	HUES48 Cell Line	embryonic stem cell
9	chr7:141062800-141066000	Weak transcription	Brain Cingulate Gyrus	brain
10	chr7:141062800-141066200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr7:141062800-141069400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr7:141062800-141069800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
13	chr7:141062800-141070200	Weak transcription	Brain Angular Gyrus	brain
14	chr7:141063000-141065400	Weak transcription	Fetal Muscle Leg	muscle
15	chr7:141063000-141065600	Weak transcription	Psoas Muscle	Psoas
16	chr7:141063000-141067600	Weak transcription	Right Atrium	heart
17	chr7:141063200-141065600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
18	chr7:141063200-141065600	Weak transcription	Brain Anterior Caudate	brain
19	chr7:141063200-141065800	Weak transcription	Cortex derived primary cultured neurospheres	brain
20	chr7:141063200-141065800	Weak transcription	Fetal Lung	lung
21	chr7:141063400-141065400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr7:141063400-141065400	Weak transcription	HSMM	muscle
23	chr7:141063400-141065800	Weak transcription	HUES64 Cell Line	embryonic stem cell
24	chr7:141063400-141065800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
25	chr7:141063400-141066000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
26	chr7:141063600-141065200	Weak transcription	Adipose Nuclei	Adipose
27	chr7:141063600-141065200	Weak transcription	Skeletal Muscle Male	skeletal muscle
28	chr7:141063600-141065400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
29	chr7:141063600-141065400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
30	chr7:141063600-141065400	Weak transcription	HUVEC	blood vessel
31	chr7:141063600-141065600	Weak transcription	HUES6 Cell Line	embryonic stem cell
32	chr7:141063600-141065800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
33	chr7:141063600-141065800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr7:141063600-141065800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
35	chr7:141063600-141065800	Weak transcription	Muscle Satellite Cultured Cells	--
36	chr7:141063600-141066000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
37	chr7:141063600-141066000	Weak transcription	NH-A	brain
38	chr7:141063600-141070600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
39	chr7:141063800-141066600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
40	chr7:141064200-141065800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
41	chr7:141064600-141066000	Enhancers	HSMMtube	muscle
42	chr7:141064800-141065200	Weak transcription	Left Ventricle	heart
43	chr7:141064800-141067000	Enhancers	Skeletal Muscle Female	skeletal muscle
44	chr7:141065000-141065200	Enhancers	Right Ventricle	heart
45	chr7:141065000-141066000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
46	chr7:141065000-141068000	Enhancers	H1 Cell Line	embryonic stem cell
47	chr7:141065000-141070200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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