| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv470051 |
chr4:89644931-90643144 |
Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
18 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
esv2830400 |
chr4:90085456-90922432 |
Flanking Active TSS Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
14 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1012406 |
chr4:90167781-91166787 |
Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
24 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv949454 |
chr4:90272120-91156917 |
Flanking Bivalent TSS/Enh Active TSS Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
22 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv879535 |
chr4:90565218-90624853 |
Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
n/a
|
| 6 |
nsv461578 |
chr4:90572322-90624853 |
Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
n/a
|
| 7 |
nsv461579 |
chr4:90572322-90624853 |
Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
n/a
|
| 8 |
nsv594818 |
chr4:90572322-90624853 |
Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
n/a
|
| 9 |
nsv461580 |
chr4:90572322-90630901 |
Enhancers Strong transcription Active TSS Flanking Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
n/a
|
| 10 |
nsv594819 |
chr4:90572322-90630901 |
Weak transcription Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
n/a
|
| 11 |
nsv522681 |
chr4:90603044-90630901 |
Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
n/a
|
rSNPs within LD-proxies of this variant (count:10)
