Variant report

Variant	rs11741382
Chromosome Location	chr16:70655110-70655111
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs1010764	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3843496	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv14380	chr16:70650573-70660117	Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Enhancers Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:70647400-70669200	Weak transcription	Right Atrium	heart
2	chr16:70647800-70664800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr16:70652400-70656800	Active TSS	ES-I3 Cell Line	embryonic stem cell
4	chr16:70652600-70655400	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
5	chr16:70652800-70655600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr16:70652800-70656000	Active TSS	H1 Cell Line	embryonic stem cell
7	chr16:70652800-70656000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr16:70653000-70655800	Active TSS	H9 Cell Line	embryonic stem cell
9	chr16:70653200-70656000	Active TSS	HUES48 Cell Line	embryonic stem cell
10	chr16:70653400-70656000	Active TSS	iPS-15b Cell Line	embryonic stem cell
11	chr16:70653800-70656000	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr16:70654200-70655400	Active TSS	ES-WA7 Cell Line	embryonic stem cell
13	chr16:70654400-70655200	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
14	chr16:70654600-70655200	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
15	chr16:70654600-70655400	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
16	chr16:70654600-70655400	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
17	chr16:70654600-70655800	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
18	chr16:70655000-70655200	Flanking Bivalent TSS/Enh	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
19	chr16:70655000-70655200	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr16:70655000-70655200	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr16:70655000-70655200	Bivalent Enhancer	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr16:70655000-70655200	Enhancers	Placenta	Placenta

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