Variant report

Variant	rs117433957
Chromosome Location	chr8:130177316-130177317
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891443	chr8:130016499-130220746	Weak transcription Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv891445	chr8:130152109-130224721	Enhancers ZNF genes & repeats Genic enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3337701	chr8:130177071-130178102	Genic enhancers Enhancers Weak transcription Strong transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130174600-130177600	Weak transcription	Cortex derived primary cultured neurospheres	brain
2	chr8:130175600-130177600	Strong transcription	Fetal Thymus	thymus
3	chr8:130176200-130177600	Enhancers	HMEC	breast
4	chr8:130176200-130178400	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr8:130176400-130177400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr8:130176400-130177600	Enhancers	ES-I3 Cell Line	embryonic stem cell
7	chr8:130176400-130179600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr8:130176600-130177400	Enhancers	NHEK	skin
9	chr8:130176600-130177800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr8:130177000-130178600	Genic enhancers	Dnd41	blood
11	chr8:130177200-130178000	Enhancers	Adipose Nuclei	Adipose
12	chr8:130177200-130178800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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