Variant report

Variant	rs117461534
Chromosome Location	chr13:63047811-63047812
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1038992	chr13:62827929-63369497	Enhancers Bivalent Enhancer Weak transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv541795	chr13:62827929-63369497	Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv1038215	chr13:62836702-63405446	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	nsv974022	chr13:63047223-63057064	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Active TSS	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:63047200-63048400	Enhancers	ES-I3 Cell Line	embryonic stem cell
2	chr13:63047200-63048400	Enhancers	HUES6 Cell Line	embryonic stem cell
3	chr13:63047200-63048600	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr13:63047400-63048200	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr13:63047600-63048000	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
6	chr13:63047600-63048200	Enhancers	HUES64 Cell Line	embryonic stem cell
7	chr13:63047600-63048400	Enhancers	H1 Cell Line	embryonic stem cell
8	chr13:63047800-63048200	Enhancers	H9 Cell Line	embryonic stem cell
9	chr13:63047800-63048600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr13:63047800-63048800	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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