The 2.0 version of rSNPBase

Variant report

Variant rs11746654
Chromosome Location chr5:115751386-115751387
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:115708600-115754000 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr5:115723000-115776000 Weak transcription Primary hematopoietic stem cells blood
3 chr5:115723600-115784800 Weak transcription Primary T helper naive cells fromperipheralblood blood
4 chr5:115730400-115769600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr5:115731000-115757000 Weak transcription Gastric stomach
6 chr5:115732600-115760200 Weak transcription Liver Liver
7 chr5:115733800-115754400 Weak transcription Primary T cells fromperipheralblood blood
8 chr5:115734200-115755200 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr5:115736200-115753600 Weak transcription Primary B cells from peripheral blood blood
10 chr5:115746800-115756600 Strong transcription Primary T cells from cord blood blood
11 chr5:115747200-115760000 Weak transcription Right Ventricle heart
12 chr5:115747400-115751600 Weak transcription Brain Substantia Nigra brain
13 chr5:115747400-115751800 Weak transcription Brain Inferior Temporal Lobe brain
14 chr5:115747400-115752000 Weak transcription Fetal Muscle Leg muscle
15 chr5:115747400-115753600 Weak transcription Psoas Muscle Psoas
16 chr5:115747400-115755000 Weak transcription Right Atrium heart
17 chr5:115747400-115760800 Weak transcription Left Ventricle heart
18 chr5:115747400-115760800 Weak transcription Pancreas Pancrea
19 chr5:115747600-115756000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr5:115747800-115751800 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr5:115747800-115757600 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr5:115747800-115764200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
23 chr5:115747800-115765600 Weak transcription Lung lung
24 chr5:115748000-115754800 Weak transcription Brain Cingulate Gyrus brain
25 chr5:115748400-115756000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr5:115748600-115783000 Weak transcription Thymus Thymus
27 chr5:115749400-115752000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr5:115749400-115752400 Weak transcription Fetal Intestine Large intestine
29 chr5:115749400-115753400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr5:115749400-115782000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr5:115750000-115752800 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr5:115750200-115779400 Weak transcription Fetal Intestine Small intestine
33 chr5:115751000-115751400 Enhancers Fetal Lung lung
34 chr5:115751000-115751600 Enhancers Fetal Muscle Trunk muscle
35 chr5:115751000-115751600 Enhancers Fetal Stomach stomach
36 chr5:115751000-115751600 Enhancers Ovary ovary
37 chr5:115751200-115751600 Strong transcription Breast Myoepithelial Primary Cells Breast
38 chr5:115751200-115751600 Enhancers Stomach Smooth Muscle stomach
39 chr5:115751200-115752000 Strong transcription Spleen Spleen
40 chr5:115751200-115758800 Strong transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015