Variant report

Variant rs117469559
Chromosome Location chr4:7658001-7658002
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:7649600-7659000 Enhancers Ovary ovary
2 chr4:7650000-7658600 Enhancers Breast Myoepithelial Primary Cells Breast
3 chr4:7650600-7658400 Enhancers Primary hematopoietic stem cells blood
4 chr4:7651200-7658600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr4:7651400-7658600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr4:7651400-7660400 Weak transcription Colonic Mucosa Colon
7 chr4:7651800-7658800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr4:7652400-7666000 Weak transcription Primary neutrophils fromperipheralblood blood
9 chr4:7654400-7659000 Enhancers Primary Natural Killer cells fromperipheralblood blood
10 chr4:7655000-7659400 Weak transcription HepG2 liver
11 chr4:7655400-7658200 Bivalent Enhancer Fetal Stomach stomach
12 chr4:7655400-7658800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr4:7655600-7665200 Weak transcription Spleen Spleen
14 chr4:7656600-7658200 Bivalent Enhancer H9 Derived Neuron Cultured Cells ES cell derived
15 chr4:7656600-7658400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr4:7656600-7658600 Enhancers Brain Substantia Nigra brain
17 chr4:7656600-7658800 Enhancers Placenta Amnion Placenta Amnion
18 chr4:7656800-7658200 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr4:7656800-7658400 Enhancers Brain Angular Gyrus brain
20 chr4:7656800-7658400 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
21 chr4:7656800-7658400 Enhancers NH-A brain
22 chr4:7656800-7658800 Enhancers Brain Anterior Caudate brain
23 chr4:7656800-7658800 Enhancers Brain Cingulate Gyrus brain
24 chr4:7656800-7660400 Enhancers Brain Inferior Temporal Lobe brain
25 chr4:7657000-7658400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr4:7657000-7658400 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
27 chr4:7657000-7658400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
28 chr4:7657000-7658600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
29 chr4:7657000-7659000 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr4:7657200-7658200 Enhancers HMEC breast
31 chr4:7657200-7658400 Enhancers Pancreas Pancrea
32 chr4:7657200-7662400 Weak transcription H1 Cell Line embryonic stem cell
33 chr4:7657400-7658400 Enhancers HUES6 Cell Line embryonic stem cell
34 chr4:7657400-7670400 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr4:7657600-7658800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr4:7657600-7659000 Enhancers Primary hematopoietic stem cells short term culture blood
37 chr4:7657600-7660400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr4:7657600-7662400 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr4:7657600-7663200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
40 chr4:7657800-7658200 Enhancers Fetal Brain Male brain
41 chr4:7657800-7659000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr4:7658000-7658200 Enhancers Fetal Brain Female brain
43 chr4:7658000-7658600 Enhancers Brain Germinal Matrix brain
44 chr4:7658000-7659000 Enhancers Brain Hippocampus Middle brain
45 chr4:7658000-7662200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

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