Variant report

Variant	rs1175152
Chromosome Location	chr1:192213236-192213237
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10494672	0.86[ASN][1000 genomes]
rs10801111	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10921129	0.85[EUR][1000 genomes]
rs1175121	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1175123	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1175126	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1175147	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1175148	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1175154	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1175155	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1175156	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1175158	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12567011	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1339129	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17413409	0.82[ASN][1000 genomes]
rs2249061	0.87[AMR][1000 genomes]
rs2249062	0.90[AMR][1000 genomes]
rs2369658	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6428094	0.84[EUR][1000 genomes]
rs6659110	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72732935	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7519610	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7532216	0.86[ASN][1000 genomes]
rs7538387	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7544311	0.86[ASN][1000 genomes]
rs7554467	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv516881	chr1:192206032-192215064	Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:192213200-192213400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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