Variant report

Variant	rs11758473
Chromosome Location	chr6:44493348-44493349
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs10948143	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2146347	0.96[CEU][hapmap]
rs35450139	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6458392	0.81[JPT][hapmap]
rs9381336	0.81[ASN][1000 genomes]
rs9472293	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44492400-44493400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
2	chr6:44492400-44496600	Enhancers	Fetal Thymus	thymus
3	chr6:44492400-44509800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
4	chr6:44492600-44493400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr6:44492800-44493400	Enhancers	HMEC	breast
6	chr6:44493000-44493600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr6:44493000-44494600	Weak transcription	Thymus	Thymus
8	chr6:44493200-44493400	Enhancers	Breast Myoepithelial Primary Cells	Breast
9	chr6:44493200-44494400	Weak transcription	Dnd41	blood
10	chr6:44493200-44498000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links