Variant report

Variant	rs11764843
Chromosome Location	chr7:18935310-18935311
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs11765532	0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498112	chr7:18677922-18991946	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv887813	chr7:18720135-18995552	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv523497	chr7:18896011-18959381	Weak transcription Flanking Active TSS Genic enhancers Enhancers ZNF genes & repeats Active TSS	TF binding region CpG island lncRNA	1 gene(s)	inside rSNPs	diseases
4	esv2756248	chr7:18911960-18977760	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island lncRNA	1 gene(s)	inside rSNPs	diseases
5	nsv1030062	chr7:18915874-18943409	Weak transcription Enhancers Genic enhancers Flanking Active TSS Active TSS	TF binding region CpG island lncRNA	1 gene(s)	inside rSNPs	diseases
6	nsv887815	chr7:18931219-18958942	Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	inside rSNPs	diseases
7	nsv887816	chr7:18935310-18959138	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers	TF binding region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:18903000-18940000	Weak transcription	Aorta	Aorta
2	chr7:18931200-18943400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr7:18931400-18940000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr7:18934400-18935600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr7:18934400-18936600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr7:18934400-18936800	Enhancers	NHLF	lung
7	chr7:18934800-18935400	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr7:18934800-18936200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr7:18934800-18936200	Enhancers	A549	lung
10	chr7:18934800-18936200	Enhancers	Hela-S3	cervix
11	chr7:18934800-18936600	Enhancers	HSMM	muscle
12	chr7:18934800-18936600	Enhancers	HUVEC	blood vessel
13	chr7:18935000-18935600	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr7:18935000-18935600	Enhancers	HSMMtube	muscle
15	chr7:18935200-18935600	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr7:18935200-18935600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr7:18935200-18935600	Flanking Active TSS	Muscle Satellite Cultured Cells	--
18	chr7:18935200-18935600	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr7:18935200-18935600	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr7:18935200-18935600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
21	chr7:18935200-18935600	Flanking Active TSS	HMEC	breast
22	chr7:18935200-18935600	Flanking Active TSS	NH-A	brain
23	chr7:18935200-18935600	Flanking Active TSS	NHDF-Ad	bronchial
24	chr7:18935200-18935600	Flanking Active TSS	NHEK	skin
25	chr7:18935200-18935600	Flanking Active TSS	Osteobl	bone
26	chr7:18935200-18936400	Enhancers	ES-I3 Cell Line	embryonic stem cell
27	chr7:18935200-18936600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr7:18935200-18936600	Enhancers	HUES48 Cell Line	embryonic stem cell
29	chr7:18935200-18936800	Enhancers	HUES64 Cell Line	embryonic stem cell

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