Variant report

Variant	rs117657198
Chromosome Location	chr8:126595069-126595070
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:126593622..126595846-chr8:126610575..126612204,2	MCF-7	breast:
2	chr8:126446451..126446990-chr8:126594852..126595545,2	MCF-7	breast:
3	chr8:126441876..126443821-chr8:126595052..126596590,2	MCF-7	breast:
4	chr8:126593642..126596532-chr8:126599701..126606279,16	MCF-7	breast:
5	chr8:126588899..126591050-chr8:126592630..126595542,2	MCF-7	breast:
6	chr8:126592991..126596537-chr8:126599819..126603670,10	MCF-7	breast:
7	chr8:126593358..126595719-chr8:126599796..126603386,4	K562	blood:

Variant related genes	Relation type
ENSG00000173334	Chromatin interaction

Extended variants
information (count: 21 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:21 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891437	chr8:126470817-126629328	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv6377	chr8:126579620-126639253	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv38	chr8:126593465-126639253	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	esv3527194	chr8:126594370-126602043	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
5	esv2635336	chr8:126594598-126601849	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
6	nsv435874	chr8:126594638-126601217	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
7	esv994135	chr8:126594655-126601136	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
8	esv3420498	chr8:126594695-126601724	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
9	esv3527191	chr8:126594796-126601839	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
10	esv7811	chr8:126594902-126601404	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
11	esv2067958	chr8:126594918-126601341	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
12	esv3371006	chr8:126595007-126601218	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
13	esv3527192	chr8:126595020-126601548	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
14	esv3527198	chr8:126595026-126601209	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
15	esv3527195	chr8:126595033-126601219	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
16	esv3527197	chr8:126595041-126601183	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
17	esv3527199	chr8:126595047-126601167	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
18	esv3480002	chr8:126595052-126601202	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
19	esv3480005	chr8:126595053-126601201	ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
20	esv3527193	chr8:126595063-126601184	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
21	esv3480003	chr8:126595067-126601153	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:126592600-126603800	Weak transcription	Pancreas	Pancrea
2	chr8:126592800-126595400	Weak transcription	Brain Substantia Nigra	brain
3	chr8:126594600-126595200	Enhancers	HUES64 Cell Line	embryonic stem cell
4	chr8:126594600-126595200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr8:126594800-126595200	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
6	chr8:126595000-126601200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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