Variant report

Variant	rs11768669
Chromosome Location	chr7:50243651-50243652
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:50243616..50247294-chr7:50434768..50437607,4	K562	blood:

Variant related genes	Relation type
ENSG00000185811	Chromatin interaction

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs11506039	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv464444	chr7:49671882-50454736	Enhancers Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Active TSS Strong transcription Weak transcription Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv606897	chr7:49671883-50454736	Flanking Active TSS Weak transcription Strong transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
3	nsv498090	chr7:49708644-50427714	Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Weak transcription Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
4	nsv1020869	chr7:49712860-50457544	Enhancers Active TSS Flanking Active TSS Strong transcription Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
5	nsv1024102	chr7:50195864-50418159	Genic enhancers Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
6	nsv1020285	chr7:50229750-50258911	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:50237200-50244000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr7:50239400-50245200	Weak transcription	GM12878-XiMat	blood
3	chr7:50240000-50244200	Weak transcription	Primary B cells from peripheral blood	blood
4	chr7:50240000-50244400	Weak transcription	Adipose Nuclei	Adipose
5	chr7:50240200-50244200	Weak transcription	Primary monocytes fromperipheralblood	blood
6	chr7:50240200-50245000	Weak transcription	Primary neutrophils fromperipheralblood	blood
7	chr7:50240200-50245000	Weak transcription	Monocytes-CD14+_RO01746	blood
8	chr7:50240400-50243800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr7:50240400-50244000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr7:50240400-50244400	Weak transcription	Primary hematopoietic stem cells	blood
11	chr7:50241600-50259000	Enhancers	Fetal Thymus	thymus
12	chr7:50241800-50244000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr7:50242200-50246200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr7:50242200-50250200	Weak transcription	K562	blood
15	chr7:50243000-50246200	Enhancers	Thymus	Thymus
16	chr7:50243200-50244400	Enhancers	Primary T helper cells PMA-I stimulated	--
17	chr7:50243400-50245000	Enhancers	Primary T cells fromperipheralblood	blood
18	chr7:50243400-50245200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
19	chr7:50243400-50248800	Enhancers	Primary B cells from cord blood	blood
20	chr7:50243600-50244800	Enhancers	Primary T cells from cord blood	blood
21	chr7:50243600-50246200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
22	chr7:50243600-50246400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
23	chr7:50243600-50247600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
24	chr7:50243600-50247800	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood

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