Variant report

Variant	rs11776793
Chromosome Location	chr8:69660668-69660669
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs2216893	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2552131	0.87[EUR][1000 genomes]
rs2554519	0.87[EUR][1000 genomes]
rs2554525	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2554527	0.87[EUR][1000 genomes]
rs2554528	0.87[EUR][1000 genomes]
rs2554708	0.85[EUR][1000 genomes]
rs2740879	0.81[EUR][1000 genomes]
rs2740881	0.84[AFR][1000 genomes]
rs2911719	0.85[EUR][1000 genomes]
rs2911720	0.83[AMR][1000 genomes]
rs2911721	0.81[EUR][1000 genomes]
rs2980785	0.85[EUR][1000 genomes]
rs2980786	0.82[EUR][1000 genomes]
rs55811315	0.84[EUR][1000 genomes]
rs7831271	0.84[EUR][1000 genomes]
rs7831840	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831349	chr8:69555461-69733515	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv465703	chr8:69641287-69814578	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv611462	chr8:69641287-69814578	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv890986	chr8:69647914-69704366	Enhancers Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:69640200-69676800	Weak transcription	Aorta	Aorta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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