The 2.0 version of rSNPBase

Variant report

Variant rs11779441
Chromosome Location chr8:102701137-102701138
allele A/C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:102683200-102702000 Weak transcription Fetal Lung lung
2 chr8:102696200-102701600 Weak transcription Gastric stomach
3 chr8:102696600-102704600 Weak transcription Brain Inferior Temporal Lobe brain
4 chr8:102696600-102708400 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr8:102696800-102701800 Weak transcription Fetal Intestine Large intestine
6 chr8:102696800-102701800 Weak transcription Fetal Intestine Small intestine
7 chr8:102696800-102701800 Weak transcription Right Atrium heart
8 chr8:102696800-102702000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr8:102696800-102702000 Weak transcription Rectal Smooth Muscle rectum
10 chr8:102697000-102703000 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr8:102697000-102706600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr8:102697600-102713000 Weak transcription Psoas Muscle Psoas
13 chr8:102697800-102701800 Strong transcription Fetal Muscle Trunk muscle
14 chr8:102697800-102703000 Strong transcription Cortex derived primary cultured neurospheres brain
15 chr8:102697800-102706800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr8:102698000-102702000 Strong transcription Liver Liver
17 chr8:102698000-102702000 Strong transcription Stomach Smooth Muscle stomach
18 chr8:102698000-102702400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr8:102698200-102701400 Strong transcription Ovary ovary
20 chr8:102698200-102701800 Weak transcription Brain Hippocampus Middle brain
21 chr8:102698200-102706000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
22 chr8:102698400-102702000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr8:102698600-102701400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr8:102698600-102704600 Weak transcription Primary T killer naive cells fromperipheralblood blood
25 chr8:102698800-102705600 Weak transcription Colonic Mucosa Colon
26 chr8:102699000-102701600 Weak transcription Pancreas Pancrea
27 chr8:102699000-102705800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr8:102699200-102702600 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr8:102699400-102701400 Weak transcription Lung lung
30 chr8:102699400-102702200 Strong transcription Primary T cells from cord blood blood
31 chr8:102699600-102701600 Strong transcription GM12878-XiMat blood
32 chr8:102699600-102701800 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr8:102699600-102702200 Weak transcription Left Ventricle heart
34 chr8:102699600-102705200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr8:102699600-102714800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr8:102700000-102702000 Weak transcription iPS-20b Cell Line embryonic stem cell
37 chr8:102700000-102702000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr8:102700000-102704600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr8:102700000-102730600 Weak transcription Aorta Aorta
40 chr8:102700200-102702800 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr8:102700400-102701200 Strong transcription Primary T cells fromperipheralblood blood
42 chr8:102700400-102701800 Weak transcription Hela-S3 cervix
43 chr8:102700400-102702000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr8:102700400-102702000 Strong transcription Fetal Muscle Leg muscle
45 chr8:102700400-102702000 Strong transcription Fetal Stomach stomach
46 chr8:102700400-102702200 Strong transcription Breast Myoepithelial Primary Cells Breast
47 chr8:102700400-102703000 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr8:102700400-102706800 Weak transcription Esophagus oesophagus
49 chr8:102700600-102701800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
50 chr8:102700600-102702000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015