Variant report

Variant	rs117950871
Chromosome Location	chr12:7590814-7590815
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3350216	chr12:7432676-7604018	Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	esv3451478	chr12:7588985-7590933	Weak transcription Active TSS Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv976561	chr12:7590619-7592246	Active TSS Bivalent/Poised TSS Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:7527600-7591200	Weak transcription	Placenta	Placenta
2	chr12:7582600-7592200	Weak transcription	Adipose Nuclei	Adipose
3	chr12:7586000-7591400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr12:7586600-7592400	Weak transcription	HMEC	breast
5	chr12:7587400-7592200	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr12:7589000-7592200	Weak transcription	HUVEC	blood vessel
7	chr12:7590000-7593400	Active TSS	ES-I3 Cell Line	embryonic stem cell
8	chr12:7590200-7593200	Active TSS	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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