The 2.0 version of rSNPBase

Variant report

Variant rs11803359
Chromosome Location chr1:95326449-95326450
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95301800-95328600 Strong transcription Fetal Intestine Large intestine
2 chr1:95312800-95328200 Weak transcription Fetal Lung lung
3 chr1:95315200-95328000 Weak transcription Gastric stomach
4 chr1:95320400-95327800 Weak transcription HepG2 liver
5 chr1:95320400-95329400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr1:95320800-95327800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr1:95320800-95327800 Weak transcription Esophagus oesophagus
8 chr1:95320800-95327800 Weak transcription Pancreas Pancrea
9 chr1:95320800-95328600 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr1:95321000-95327800 Weak transcription Lung lung
11 chr1:95321000-95328000 Weak transcription Right Ventricle heart
12 chr1:95321000-95328400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr1:95321200-95327400 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr1:95321200-95327600 Weak transcription Small Intestine intestine
15 chr1:95321200-95327600 Weak transcription HSMM muscle
16 chr1:95321200-95328000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr1:95321200-95328200 Weak transcription NHDF-Ad bronchial
18 chr1:95321200-95328200 Weak transcription Osteobl bone
19 chr1:95321200-95328400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr1:95321200-95329800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr1:95321400-95327200 Weak transcription Colon Smooth Muscle Colon
22 chr1:95321400-95327800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr1:95321400-95328400 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr1:95321400-95330600 Weak transcription Brain Hippocampus Middle brain
25 chr1:95321600-95327600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr1:95321800-95328400 Weak transcription Colonic Mucosa Colon
27 chr1:95322000-95327400 Weak transcription Placenta Amnion Placenta Amnion
28 chr1:95322000-95327400 Weak transcription NHEK skin
29 chr1:95322000-95328200 Weak transcription Stomach Mucosa stomach
30 chr1:95322000-95328400 Weak transcription A549 lung
31 chr1:95322200-95326800 Strong transcription Fetal Intestine Small intestine
32 chr1:95322200-95327800 Weak transcription Hela-S3 cervix
33 chr1:95323000-95327800 Weak transcription Placenta Placenta
34 chr1:95324000-95326600 Enhancers Fetal Muscle Leg muscle
35 chr1:95324200-95327400 Weak transcription HMEC breast
36 chr1:95324200-95327600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr1:95324200-95327800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:95324200-95328000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr1:95324600-95326600 Strong transcription Duodenum Mucosa Duodenum
40 chr1:95324800-95327800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr1:95324800-95328200 Strong transcription Rectal Mucosa Donor 31 rectum
42 chr1:95325400-95327800 Weak transcription H1 Cell Line embryonic stem cell
43 chr1:95325400-95327800 Weak transcription HUES6 Cell Line embryonic stem cell
44 chr1:95325400-95328000 Weak transcription Right Atrium heart
45 chr1:95325400-95328200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr1:95325400-95328200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr1:95325400-95328200 Weak transcription Ovary ovary
48 chr1:95325400-95329400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr1:95325600-95327200 Weak transcription Fetal Stomach stomach
50 chr1:95325600-95327400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015