Variant report

Variant	rs118059180
Chromosome Location	chr1:94851074-94851075
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428510	chr1:94709575-94866655	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	nsv871097	chr1:94850443-94941890	Weak transcription Active TSS Enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:39 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:94846200-94854400	Enhancers	Fetal Intestine Small	intestine
2	chr1:94846600-94851200	Enhancers	Primary hematopoietic stem cells	blood
3	chr1:94846600-94851400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr1:94847400-94851800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr1:94849200-94851200	Enhancers	Fetal Kidney	kidney
6	chr1:94849400-94851200	Enhancers	Primary T helper naive cells from peripheral blood	blood
7	chr1:94849400-94851600	Active TSS	Rectal Mucosa Donor 29	rectum
8	chr1:94849600-94851200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr1:94849600-94851200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
10	chr1:94849600-94851400	Enhancers	Primary T helper cells fromperipheralblood	blood
11	chr1:94849600-94851800	Enhancers	Primary hematopoietic stem cells short term culture	blood
12	chr1:94849600-94852200	Enhancers	Pancreatic Islets	Pancreatic Islet
13	chr1:94849800-94851200	Enhancers	Right Atrium	heart
14	chr1:94850000-94851200	Flanking Active TSS	Duodenum Mucosa	Duodenum
15	chr1:94850000-94851200	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
16	chr1:94850000-94851400	Flanking Active TSS	HepG2	liver
17	chr1:94850000-94854000	Enhancers	Fetal Intestine Large	intestine
18	chr1:94850200-94851200	Enhancers	Primary monocytes fromperipheralblood	blood
19	chr1:94850200-94851200	Flanking Active TSS	Primary T cells from cord blood	blood
20	chr1:94850200-94851200	Enhancers	Pancreas	Pancrea
21	chr1:94850200-94851200	Flanking Active TSS	Thymus	Thymus
22	chr1:94850200-94851200	Enhancers	Spleen	Spleen
23	chr1:94850200-94851200	Flanking Active TSS	Dnd41	blood
24	chr1:94850200-94851400	Active TSS	Rectal Smooth Muscle	rectum
25	chr1:94850200-94851400	Flanking Active TSS	A549	lung
26	chr1:94850400-94851200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
27	chr1:94850400-94851400	Active TSS	Colonic Mucosa	Colon
28	chr1:94850600-94851200	Enhancers	Primary T killer memory cells from peripheral blood	blood
29	chr1:94850600-94851400	Flanking Active TSS	Fetal Thymus	thymus
30	chr1:94850800-94851200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
31	chr1:94850800-94851200	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
32	chr1:94850800-94851200	Enhancers	Sigmoid Colon	Sigmoid Colon
33	chr1:94850800-94851400	Enhancers	Liver	Liver
34	chr1:94850800-94851800	Enhancers	Primary T helper cells PMA-I stimulated	--
35	chr1:94851000-94851200	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
36	chr1:94851000-94851200	Enhancers	Esophagus	oesophagus
37	chr1:94851000-94851200	Enhancers	Gastric	stomach
38	chr1:94851000-94851200	Enhancers	Left Ventricle	heart
39	chr1:94851000-94851200	Flanking Active TSS	Stomach Mucosa	stomach

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