The 2.0 version of rSNPBase

Variant report

Variant rs11809438
Chromosome Location chr1:169620168-169620169
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:17 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169617000-169620600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
2 chr1:169618600-169633800 Weak transcription Primary neutrophils fromperipheralblood blood
3 chr1:169619000-169620800 Enhancers Brain Substantia Nigra brain
4 chr1:169619200-169620800 Enhancers Brain Inferior Temporal Lobe brain
5 chr1:169619400-169620400 Weak transcription Brain Cingulate Gyrus brain
6 chr1:169619400-169626200 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr1:169619600-169620200 Enhancers Brain Hippocampus Middle brain
8 chr1:169619600-169624800 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr1:169619600-169631400 Weak transcription Primary T cells from cord blood blood
10 chr1:169619800-169620600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
11 chr1:169619800-169625000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr1:169619800-169625000 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr1:169620000-169620400 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr1:169620000-169623200 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr1:169620000-169623400 Weak transcription Primary T helper cells fromperipheralblood blood
16 chr1:169620000-169624800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr1:169620000-169625400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015