Variant report

Variant	rs11809792
Chromosome Location	chr1:63217344-63217345
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs12124310	0.84[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3333680	chr1:63216564-63218512	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:63208800-63220400	Weak transcription	HUES48 Cell Line	embryonic stem cell
2	chr1:63211000-63222200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr1:63212400-63218600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr1:63217000-63217800	Enhancers	Liver	Liver
5	chr1:63217000-63217800	Enhancers	Ovary	ovary
6	chr1:63217000-63218400	Enhancers	Aorta	Aorta
7	chr1:63217200-63220000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
8	chr1:63217200-63220400	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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