Variant report

Variant	rs11815621
Chromosome Location	chr10:118175565-118175566
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11816076	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17094705	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17094718	1.00[CEU][hapmap]
rs1835666	1.00[CEU][hapmap];0.87[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59729475	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73375802	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73377406	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73377427	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832001	chr10:118138370-118315059	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:118174000-118177600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
2	chr10:118175400-118176600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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