Variant report

Variant	rs118167953
Chromosome Location	chr5:35659632-35659633
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv525477	chr5:35530905-35792990	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv880510	chr5:35659239-35709184	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv881146	chr5:35659239-35714851	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:35618600-35678000	Weak transcription	Left Ventricle	heart
2	chr5:35630400-35662400	Weak transcription	Aorta	Aorta
3	chr5:35630600-35663400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr5:35630600-35707600	Weak transcription	Pancreas	Pancrea
5	chr5:35634800-35673200	Weak transcription	Brain Anterior Caudate	brain
6	chr5:35635600-35660400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr5:35635600-35665400	Weak transcription	Fetal Intestine Small	intestine
8	chr5:35635800-35664000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr5:35639400-35664600	Weak transcription	Monocytes-CD14+_RO01746	blood
10	chr5:35640600-35664000	Weak transcription	Primary hematopoietic stem cells	blood
11	chr5:35642600-35673000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
12	chr5:35645200-35662200	Weak transcription	Duodenum Smooth Muscle	Duodenum
13	chr5:35645200-35663800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr5:35645200-35673600	Weak transcription	Fetal Kidney	kidney
15	chr5:35648200-35663400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
16	chr5:35651200-35673000	Weak transcription	Ovary	ovary
17	chr5:35651600-35664600	Weak transcription	Primary T cells fromperipheralblood	blood
18	chr5:35651800-35663400	Weak transcription	Dnd41	blood
19	chr5:35652000-35665000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
20	chr5:35656000-35661800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
21	chr5:35656400-35663800	Weak transcription	Rectal Smooth Muscle	rectum
22	chr5:35656400-35670600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr5:35657200-35660400	Weak transcription	Osteobl	bone
24	chr5:35657400-35673000	Weak transcription	Fetal Heart	heart
25	chr5:35657800-35660200	Enhancers	Primary T cells from cord blood	blood
26	chr5:35658600-35664200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
27	chr5:35658800-35660600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr5:35658800-35665000	Weak transcription	Primary T helper cells fromperipheralblood	blood
29	chr5:35659200-35659800	Enhancers	Primary T helper cells PMA-I stimulated	--
30	chr5:35659200-35660200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
31	chr5:35659400-35660000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood

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