Variant report

Variant	rs11819603
Chromosome Location	chr10:98092810-98092811
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs11816201	1.00[AFR][1000 genomes]
rs11818391	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3413353	chr10:98039370-98561524	Enhancers Genic enhancers Weak transcription Strong transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
2	nsv831950	chr10:98080972-98245434	Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:98089600-98095200	Genic enhancers	Dnd41	blood
2	chr10:98091200-98094800	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr10:98091600-98094800	Enhancers	Fetal Thymus	thymus
4	chr10:98091800-98093200	Genic enhancers	Thymus	Thymus
5	chr10:98091800-98093800	Enhancers	Primary T helper cells PMA-I stimulated	--
6	chr10:98091800-98094000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
7	chr10:98092000-98094200	Enhancers	Primary T helper cells fromperipheralblood	blood
8	chr10:98092000-98095000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
9	chr10:98092200-98094800	Enhancers	Primary T helper naive cells from peripheral blood	blood
10	chr10:98092200-98096200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr10:98092400-98093400	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
12	chr10:98092400-98093600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
13	chr10:98092400-98093600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
14	chr10:98092400-98093600	Enhancers	Primary T killer memory cells from peripheral blood	blood
15	chr10:98092600-98093400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
16	chr10:98092600-98093600	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 1	blood
17	chr10:98092600-98097800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr10:98092800-98094000	Enhancers	Primary T cells from cord blood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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