Variant report
| Variant | rs11833860 |
|---|---|
| Chromosome Location | chr12:49515332-49515333 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:49505400-49521000 | Weak transcription | Spleen | Spleen |
| 2 | chr12:49511400-49520600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 3 | chr12:49511600-49520800 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 4 | chr12:49511600-49521000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 5 | chr12:49513600-49520800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 6 | chr12:49514800-49515400 | Enhancers | HUES6 Cell Line | embryonic stem cell |
| 7 | chr12:49514800-49515400 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
| 8 | chr12:49514800-49515400 | Enhancers | Brain Anterior Caudate | brain |
| 9 | chr12:49514800-49515400 | Enhancers | Brain Cingulate Gyrus | brain |
| 10 | chr12:49514800-49515400 | Enhancers | A549 | lung |
| 11 | chr12:49514800-49515400 | Enhancers | Hela-S3 | cervix |
| 12 | chr12:49514800-49515400 | Enhancers | NHDF-Ad | bronchial |
| 13 | chr12:49515000-49520600 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 14 | chr12:49515000-49520600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 15 | chr12:49515000-49520800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 16 | chr12:49515000-49520800 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 17 | chr12:49515000-49520800 | Weak transcription | Adipose Nuclei | Adipose |
| 18 | chr12:49515000-49520800 | Weak transcription | Colonic Mucosa | Colon |
| 19 | chr12:49515000-49520800 | Weak transcription | Duodenum Mucosa | Duodenum |
| 20 | chr12:49515000-49520800 | Weak transcription | Fetal Kidney | kidney |
| 21 | chr12:49515000-49520800 | Weak transcription | Left Ventricle | heart |
| 22 | chr12:49515000-49520800 | Weak transcription | Pancreas | Pancrea |
| 23 | chr12:49515000-49520800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 24 | chr12:49515000-49520800 | Weak transcription | HSMM | muscle |
| 25 | chr12:49515000-49520800 | Weak transcription | HUVEC | blood vessel |
| 26 | chr12:49515000-49520800 | Weak transcription | K562 | blood |
| 27 | chr12:49515000-49520800 | Weak transcription | NHLF | lung |
| 28 | chr12:49515000-49521000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 29 | chr12:49515000-49521000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 30 | chr12:49515000-49521000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 31 | chr12:49515000-49521200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 32 | chr12:49515000-49521200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 33 | chr12:49515000-49521200 | Weak transcription | Liver | Liver |
| 34 | chr12:49515000-49521600 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 35 | chr12:49515000-49522800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 36 | chr12:49515000-49522800 | Weak transcription | Stomach Mucosa | stomach |
| 37 | chr12:49515200-49515400 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 38 | chr12:49515200-49515400 | Enhancers | Brain Hippocampus Middle | brain |
| 39 | chr12:49515200-49515400 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 40 | chr12:49515200-49515400 | Enhancers | Brain Dorsolateral Prefrontal Cortex | brain |
| 41 | chr12:49515200-49515400 | Enhancers | Osteobl | bone |
| 42 | chr12:49515200-49520800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 43 | chr12:49515200-49520800 | Weak transcription | Fetal Muscle Leg | muscle |
| 44 | chr12:49515200-49521000 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 45 | chr12:49515200-49521000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 46 | chr12:49515200-49521000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 47 | chr12:49515200-49521000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 48 | chr12:49515200-49521000 | Weak transcription | HepG2 | liver |
| 49 | chr12:49515200-49522800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
